>PF06685 (253 residues) QVSNALFELTINSGIFPREALTKAIELREQVTPRLLGYLETTEKYAYEQRDNDNLMLHIY ALYLLAQFREQRAYPIIINFFSLPGKISLEITGDVVTEDLHRILASVYDGDDTLLKNLIE DEQVNEYVRDAGIRTFVTLVVCGQKSRDEVIAYLKTLFGKLERKPSFTWNSLVYVCMDLY PEEVDAEIRQVAKEGLTEEVLLTKEINILGLHEEALKKSYALGKEKTLEKLQNDDHYTLI DDTIRELKDWSCF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | QVSNALFELTINSGIFPREALTKAIELREQVTPRLLGYLETTEKYAYEQRDNDNLMLHIYALYLLAQFREQRAYPIIINFFSLPGKISLEITGDVVTEDLHRILASVYDGDDTLLKNLIEDEQVNEYVRDAGIRTFVTLVVCGQKSRDEVIAYLKTLFGKLERKPSFTWNSLVYVCMDLYPEEVDAEIRQVAKEGLTEEVLLTKEINILGLHEEALKKSYALGKEKTLEKLQNDDHYTLIDDTIRELKDWSCF | |||||||||||||||||||
1 | 6tc0C | 0.11 | 0.10 | 0.90 | 1.17 | DEthreader | AVGHLYRLTFLEESQSRVAALEASGTLAPAFSRHLLPKLAEELHKGES-TKCSRHFRCLQALSAVSTHPVKETLPLLLQHLCANGNMVESSEVVAVCQSLQQVAEKCSYWYHKTAVPCLFAVQLLDEVLAALASVIGTATTHLSPLAAQSVTCIVPLFDGQPSSGRRLVALLTAFVCSLRVIQLNRLMRELLKQSHFSSTATK-AGDQFTLLLWVTKAL-LRY---LTRAGHAD------------------- | |||||||||||||
2 | 6reyc | 0.09 | 0.09 | 0.92 | 1.17 | DEthreader | YVPKIFTRILSNAYDIGH-AVIWITAMMKLVQKHLAGLFNSITSFYHSNNGRWLNKLMKLLQRLPNVVTFVQCIIQPVLLAMF-SKT-G---SLEAA-QALQNLALMRPELIPPVLERTYPAEHQLTATLSCVIGVARSLVSGGRWFPEGPTHMLPLLMRALPGVCMITFQFIATFSTLVPLTFEDFVLQFMDRCFGLIVGLSSTSRMVDMCRAAVKCC-EYCSVPGGKPGDLVKKENRLHG----------- | |||||||||||||
3 | 4xl5C | 0.15 | 0.13 | 0.87 | 1.00 | FFAS-3D | KVEMYIKNLQDDSPPVRVYAAFALGKGDERAVEPLIKAL-----------KDEDASVRYAAATALGQIGDERAVEPLIKALKDEDGYVREALGQIGDERAVEPLIKALKDEDPWVRLIKALKDEDPWVRLTAARALGQI------GDERAVEPLIKA---LKDEDASVRKAAAVALGQIGDERAVEPLIKALKDE--DEYV-------RQRAASALGKIGGERVRAAMEKLAEPAPGFARKVAVNYLET---- | |||||||||||||
4 | 6reyc | 0.05 | 0.05 | 0.92 | 1.17 | DEthreader | VPKIFTRISAYDIGHAVIWITAMMGKVQKHLAGLFNSITSFYHPSNNGRWLNKLMKLLQRLPNSVVVDFVQCIIQPVLLAMFS--KT-G--SL-EAAQALQNLALMRPELVIPPVLERTYPAPQLTATLSCVIGVARSLVSGGRFP--EGPTHMLPLLMRAPGDKCMITFFIATFSTLVPLVTEFEDFVLQFMDRCFLLSTFSTILM-DMRAAVKCCECSGGFPKDWGKPGDLKKMENRLHG----------- | |||||||||||||
5 | 1vsy42 | 0.11 | 0.09 | 0.84 | 1.00 | DEthreader | YDKILIDLTIISSLKQFTRVIRFIVMYRVHITNVLSMLVSKL---DMN-DTN-LTSNLINGIVSIAAIIFQSMLKVYVEKIFQLVDVDLESLVTKINQTTMILQESMIFNYASLLNRNFWSNSFNYELVTIPLAALVRRNN-----G-LSKELVRTLLFHIQILVLTALNDVLRNC-HESLLEYSDELITFMKYLYITSIVIH--S----A---LA--TL-C---TT--EIT----DCRLFGGLQ-------- | |||||||||||||
6 | 6tc0C | 0.11 | 0.10 | 0.89 | 1.17 | DEthreader | AVGHLYRLTFLEESQCRVAALEASGTLAPAFSRHLLPKLAEELHKGES-TKCSRHFRCLQALSAVSTHPIKETLPLLLQHLCQANNMVESSEVVAVCQSLQQVAEKCSYWYHKTAVPCLFAVQLLDEVLAALASVIGTATTHLSPLAAQSVTCIVPLFGFQPSSGRRLVALLTAFVCSLVIPQLNRLMRELLKQHCFSSTATK-AVDQFTLLLWVT-AL--RY---LTRAGHAD------------------- | |||||||||||||
7 | 6u1sA1 | 0.12 | 0.08 | 0.68 | 0.63 | HHpred | --------------EFMARAISAIAELAKKAIEAIYRLADNHT-T---------DTFMAKAIEAIAELAK-EAIKAIADLAKNHT----------TEEFMARAISAIAELAIDAIYRLARNHT-TDTFMAKAIEAIAELA-------KEAIKAIADLAKN--HTTEDFMDEAISAIAELAR-KAIEAILRLASNLTSETYM-----------R-KAQEAIEKIARTAEEA----------------------- | |||||||||||||
8 | 3ltjA | 0.17 | 0.11 | 0.69 | 0.68 | DisCoVER | KVEMYIKNLQDDSYYVRRAAAYALGKIGERAVEPLIKAL---K---D-----EDAWVRRAAADALGQIGDERAVEPLIKALKD---EDG-WV---RQ-SAAVALGQIGDRAVEPLIKALKD--EDWFVRIAAAFALGEI-------G--DERAVEPLIKALKDEDGWVRQSAADALGEIGGERVRAAMEKLAGTGFARK-VA----------V-NY---L--------------------------------- | |||||||||||||
9 | 6fsqA | 0.14 | 0.13 | 0.94 | 0.33 | MRFsearch | -VEPLIKALKDEDAWVRRAAADALGQIDERAVEPLIKALKRAVEPLIKALKDEDWFVRIAAAFALGEIGDERAVEPLIKALKDEDGWVRQSAADPVRYDAADALGKIGERAVEPLIKALKD--EDPNVRASAADALGKIG------DERAVEPLIKALKD---EDGYVRFSAALALGKIGDERAVEPLIKALKDEDSDERAVEPLIKALKDEDWQVRKAAAVAVRAAMEKLAETGTGFARKVAVNYLET---- | |||||||||||||
10 | 4xl5C | 0.14 | 0.13 | 0.87 | 0.91 | SPARKS-K | KVEMYIKNLQDDSPPVRVYAAFALGKIDERAVEPLIKALERAVEPLIKALKDEDGYVRTAAAEALGQIGDERAVEPLIKALKDED--------PWVRLTAARALGEIDERAVEPLIKALKDE--DPWVRLTAARALGQIG------DERAVEPLIKAL---KDEDASVRKAAAVALGQIGDERAVEPLIKALK---------DEDEYVRQRAASALGKIGGERVRAAMEKLAEP----APGFARKVAVNYLET | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |