>PF06681 (208 residues) FYNSLPPANYNLSDLTVTPMTYRDRIIVEFILNATSWLFSALLVIFVRLRKAIWMSLKST IVFVTLGSFLLNIPLILFQAWMVFNLQAGHQPVYTVFVCSFLKNFCSSTTSAYQVLPFAV SLYRYRTVVLKGHPSPWFVINVHIIVTTIFIIYAFLNYPFGENNKNDVCYTLRFSNGMEL VRIFSTLFFNFAAIIVNFVILRFVKHFE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | FYNSLPPANYNLSDLTVTPMTYRDRIIVEFILNATSWLFSALLVIFVRLRKAIWMSLKSTIVFVTLGSFLLNIPLILFQAWMVFNLQAGHQPVYTVFVCSFLKNFCSSTTSAYQVLPFAVSLYRYRTVVLKGHPSPWFVINVHIIVTTIFIIYAFLNYPFGENNKNDVCYTLRFSNGMELVRIFSTLFFNFAAIIVNFVILRFVKHFE | |||||||||||||||||||
1 | 6elhA | 0.10 | 0.10 | 0.93 | 1.00 | DEthreader | ------IKEDGS--SYPIAVEYWRWWVVHLWVEGFFEVFATAAFAFVFYNMGFVAKRLRWPLMCFVAVAFWNMIAGVFGFLIN-PP---ISLF-YIQGLNTSAVHAHAALFGYGFLALGFVLLVA-RYLKPNVQFDDKLMTWGFWLNGGLVGMIAISLPVGIQASLWARSEFLQLDTLRWVRTAADLIFIGGAICVAIQATKIVFGRD | |||||||||||||
2 | 3gtdA | 0.08 | 0.07 | 0.93 | 1.00 | DEthreader | RIAGEFEDNFPTNEVIPVNKQSTAMHIATVLATKQQLIPALNNLLTYLQD-KSKWLKFSGYITQIEYALERIEDA-LKKVYL--LAQGDTAPNKESAHDALVEFSGTLN---TIAVSLMKIANDIRLLGELHLPNPTQVEALTMVCTQVMGNHVTVTIAGSN--------GHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGL | |||||||||||||
3 | 6me6A2 | 0.09 | 0.09 | 0.92 | 1.03 | HHsearch | -------------DGARPSWVAPALSAVLIVTTAVDVVGNLLVILSVLRNRKLRNAGNLFLVSLALANLVVAFYPY---PLILVAIF-YDGWAFGEEHCKASAFVMGLSVIGSVWNITAIAIDRYLYICHSMIYRRWHTPLHICLIWLLTVVALLPNFFVGSLERIYSCTFIQTASTQYAAVVVIHFLLPIAVVFCYLRIWVLVLQAR | |||||||||||||
4 | 4a01A | 0.06 | 0.06 | 0.94 | 1.00 | DEthreader | LKVKLERGVAFAFRS-----IADNVGDNVGIAGMGSDLFGSYAESSCAALLYPVSLCVAGALGMLSTITGL-IDAYGPISDNAGGIAEMGMIRRTDALDAAGNTTAAI-KG--FAIGSAALVSLALFGAFVSRLSGVLAGSLVSGVQIAISASNTGGAWDAKYIAGAS-ARGKHAVIDTIGDPLKDTSGPSLNILIKLMAVESLVF-- | |||||||||||||
5 | 3ayfA | 0.10 | 0.09 | 0.93 | 1.00 | DEthreader | ------NPVTDV--TNFTMADFWRWWIIHLWVEGIFEFAVVVIGFLLVQLRL--GFPYKATFWFLISTAIWNLGAGVFGFLIN-LP----AVSYFEHGQFLTPAHGHAAMMGYGMFAIAVLLYSLRNIVKPEAWNDKWLKFSCWMLNIGLAGMVVITLPVGLQEAYWSRSPSFLQDQLLLVRAVPDTIFLIGVVALLVFAIKALFHLR | |||||||||||||
6 | 1j3uA | 0.07 | 0.07 | 0.92 | 1.00 | DEthreader | EVEGKWN-DQFINEVIAVNQAFTATHIAVLSLLNQLIETTKYMQQEFMKKADEFALGQEAYARVIARDIERIANT-RNNLYD--INMGASAQHDAQNTDCYTEVSSALK---VCMINMSKIANDLRMA-EIVLPNPVMPEVMNQVAFQVFGNDLTITSASEA--------GQFELNVMEPVLFFNLIQSISIMTNVFKSFTNCLKGIK | |||||||||||||
7 | 6i9kA | 0.13 | 0.12 | 0.96 | 0.60 | HHpred | -VDLLPEDMLPMKFPPMETSMHYILGMLIIVIGIISVSGNGVVMYLMMTVKNLRTPGNFLVLNLALGMLFFMMPTMSINCF-------AETWVIGPFMCELYGMIGSLFGSSIWSL-VMITLDRYNVIVKGMALTKVGALLRMLFVWIWSLGWTIAPMYWSREGSMTSCTIDYIDTAILIAYAIFVYFVPLFIIICYAFIVMQVAAHE | |||||||||||||
8 | 6rz6A1 | 0.12 | 0.10 | 0.85 | 0.59 | DisCoVER | -------------RNCTIENFKREFFPIVYLIIFFVGVLGNGLSIYVFLQ-PYSTSVNVFMLNLAISNLLFIST-LPFRAD-YY--LR---G-SNWIFGDLACRIMSYSLYV-NMYSSIYFLTVLSVVRFRVTSIRSAWILCGIIWILIMASSIMLL---DSEQSVTSCLCKDHKALVIT----LALAAANACF-NPLLYYGEFKDR- | |||||||||||||
9 | 6wwzR | 0.15 | 0.13 | 0.90 | 0.17 | MRFsearch | ----------------VRQFSRLFVPIAYSLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGA-----WVFSNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQATSRTLPRSKIICLVVWGLSVIISSSTFVFNQKYGSDVCEPKYWKLLMLGLELLFGFFIPLMFMIFYTFIVKTLVQAQ | |||||||||||||
10 | 3c9lA | 0.10 | 0.10 | 0.98 | 0.71 | SPARKS-K | NKTGVVRSPFEAPYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHK----KLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPFRFGENHAGVAFTWVMALACAAPPLWSRYIPEGMQCSCGIDYYTPHNESFVIYMFVVHFIIPLIVIFFCYGQLVFTV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |