>PF06673 (347 residues) MGVNETQEMMKQAIEAGVKVRELETKVEELNKEREELKKEREANIPSEKPQDVERKFMRE LGDKMTEMPEQGFLREFANASALNVVNSLGSITSKYARKSGIYDGAMKARFQGLTLAEDG VDDTFIEGTFKAGTDKNKAQTASKRSLRPQMAEAYLQMDKATVRGVNDSGALSEYVMSEM VNRVIQKVEHNMILGSADGSNGFYGLKTATDGWTKQIEYTDLFDGITDAVAECSISDAIT IVMSPQTFAELRKAKGTDGHSRFNELATKEQIAQSFGAVNLETRVWMPKDEVAVYNHDEY VLIGDLNVENYNDFDLRYNVEQWLSETLVGGSIRGKNRSAYLTKKAS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MGVNETQEMMKQAIEAGVKVRELETKVEELNKEREELKKEREANIPSEKPQDVERKFMRELGDKMTEMPEQGFLREFANASALNVVNSLGSITSKYARKSGIYDGAMKARFQGLTLAEDGVDDTFIEGTFKAGTDKNKAQTASKRSLRPQMAEAYLQMDKATVRGVNDSGALSEYVMSEMVNRVIQKVEHNMILGSADGSNGFYGLKTATDGWTKQIEYTDLFDGITDAVAECSISDAITIVMSPQTFAELRKAKGTDGHSRFNELATKEQIAQSFGAVNLETRVWMPKDEVAVYNHDEYVLIGDLNVENYNDFDLRYNVEQWLSETLVGGSIRGKNRSAYLTKKAS | |||||||||||||||||||
1 | 6tswB | 0.11 | 0.08 | 0.73 | 1.82 | HHpred | -------------------------------------------------------------------------------------PQTSETIRGVLRSTASLRQIASVVNVEAFDVLDKTDMGSGWAS---ETAALSETTQIDRITIPLHELAAMPKASQRLLDDS-AF-DIETWLANRIADKFARAEAAAFISGDGVDKPGFTKVANYVAGAAGDFASDAVVDL-VYALGAEY-RANASFVMNSKTAGAVRKMKDADGRFLWADSLAAGEPARLMGYPVLIAEDMPDIYAIAFGDFGNYTIAERPDLRVLRDPFSAKPHVLFYASKRVGGDVSDFAAIKLLKFAA- | |||||||||||||
2 | 6tswB | 0.13 | 0.10 | 0.73 | 2.74 | HHsearch | ---------------------------------------------------------------------------------ALNSAAAEGTIRGVLRSTASLRQIASVVNVEAFDVLDKTDMGSGWAS---ETAALSETTQIDRITIPLHELAAMPKASQRLLDD---SADIETWLANRIADKFARAEAAAFISGDGVDK--PTGFTKTVAGAAGDFASDAVVDL-VYALGAEY-RANASFVMNSKTAGAVRKMKDADGRFLWADSLAAGEPARLMGYPVLIAEDMPDIAAIAFGDFGNYTIAERPDLRVLRDPFSAKPHVLFYASKRVGGDVSDFAAIKLLKFAA- | |||||||||||||
3 | 6tswB | 0.12 | 0.09 | 0.77 | 1.02 | FFAS-3D | -----------------------------------------------------------------------------AEGGYLVDPQTSETIRGVLRSTASLRQIASVVNVEATSFDVLVDKTDMGSGWASETAALSETAQIDRITIPLHELAAMPKASQRLLDDSAF--DIETWLANRIADKFARAEAAAFISGDGVDKWAWGSLGYVATGAAGDFAAVNASDAVVDLVYALGAEANASFVMNSKTAGAVRKMKDADGRFLWADSLAAGEPARLMGYPVLIAEDMPDIAAIAFGDFGNYTIAERPDLRVLRDPFSAKPHVLFYASKRVGGDVSDFAAIKLLKFAA- | |||||||||||||
4 | 2fs3A | 0.15 | 0.11 | 0.73 | 1.95 | HHpred | ----------------------------------------------------------------------------------LGSDADSAGIIMPGLRRLTIRDLLAQGRTSSLEYVEEVFNNADVVA---EKALYPESDTFSKQTANVKTIAHWVQASRQVMDD---APMLQSYINNRLMYGLALKEEGQLLNGDGTGDNGLNKVATYDTSLNGDTRADIIAHAIYQVTESEF-SAS-GIVLNPRDWHNIALLKDNEGRYIFG-GPQAFTSNIMWGLPVVPTKAQ-A-AGTFVGGFDMSQVWDRMDAEVSREDNFVKNMLTILCEERLALAHYRPTAIIKGTFSS- | |||||||||||||
5 | 2fs3A | 0.15 | 0.11 | 0.73 | 2.73 | HHsearch | ---------------------------------------------------------------------------------SLGSDADSAGIIMPGLRRLTIRDLLAQGRTSSLEYVEEVFNNADVVA---EKALYPESDTFSKQTANVKTIAHWVQASRQVMDD---APMLQSYINNRLMYGLALKEEGQLLNGDGTGDNGLNKVATYDTSLNGDTRADIIAHAIYQVTESEF-SAS-GIVLNPRDWHNIALLKDNEGRYIFG-GPQAFTSNIMWGLPVVPTKAQ-A-AGTFVGGFDMSQVWDRMDAEVSREDNFVKNMLTILCEERLALAHYRPTAIIKGTFSS- | |||||||||||||
6 | 6i9gA | 0.10 | 0.07 | 0.75 | 1.00 | MAPalign | ------------MNNLYRELAPVDAAWHEIETEAIRTFKRH----------------------------------------------------------IAGRRVVDVSEPSGPVTAAVSTGHLRDISPPGDGVVA---HLRESKPL--VRLRVPFTVTRSAIDDVRGSQDSDWDPVKAAAKKLAFVEDRAIFEGYPAAQIDGIRQCTSNPVLQLPDDARDITDVIAQALSELGVDGPYSVLLSAEVYTKVSETTE-HGYPI------REHLNRLV-DGDIIWAPAI--DGAFVLSTRGDFDLRLGTDVSIGYLSHDAETVQLYLEETLTFLCYTSEASVALTP--- | |||||||||||||
7 | 4kf7A | 0.08 | 0.05 | 0.68 | 0.67 | DEthreader | --------------TK-FAPPTVNINAALRVVIIEYQSRAHSH-L----LS-TQD-VANVQEAAG--VG-DAQASAIVALLNVTT-----RLLATYLSERR-SFLAAVDALLAFLLHSRAPG--TGV--------------------LDLA------M--TEQFEVDWIRTALEAICFFLVAAISLKLLNVDRTLS---------VDLL-EEE---E---PYLASSDNLAQMHTTIAAWLHQMGYQERA--R-----------IVSIEA--YDVFLVSQQLERNI--------E-MARIATQVYELMADVCQLAAFPLGARARLTFQDLLKRSAHYVG--------- | |||||||||||||
8 | 5a22A | 0.05 | 0.04 | 0.77 | 0.83 | DEthreader | LISDDIDNLIFNWDGVEMLCQANPI-MKWMGSWLMSDN-AK-RWTDSF-ILAYLCQKFLDLHKLTICFISEGWAYMDRNFLLMVDVIGRYGIKMVEPICNLKLMFEHI-K-----G--------DSSSGQGLKSYEAICIAVKVLAQGDNQYGKIPIF---RG---------V--IR-GLETKRWSRVTCVT----N--DQINSSTNATVAHANPINAMIQYNYFGTFARLLLHDPALMPVSMSVESLFWR-IHHARSEHLKEM--------PE-------KLDPTS-------SPAFQNS-----------FRPA-LG-TSESTSILQPWERES----M-HGGFAR | |||||||||||||
9 | 3j4uA | 0.13 | 0.07 | 0.59 | 1.40 | HHpred | -----------------------------------------------------------------------------ADVAA--RMTPDPQIVEMLNETNEILDDMTVIEANFHKTTRSGLPTGTWRKLN---YGVQPEKRTVQVKDSMGMLETYAEVDKALAD---LNGNSAAWRLSEDREGMNQTQATTLFYGDSSIDMGLTPRNNIIDAAAGADLIDLMTQA-VELIPNVG-MGRPAFYMPRKIRSFLRRQITNKVATLTMEEIAGKKVVAFDGIPCRRTDALLLTERV------------------------------------------------------- | |||||||||||||
10 | 6tswB | 0.09 | 0.06 | 0.67 | 0.88 | DisCoVER | -ETIRGVLRS--TA-S---LRQIASVV--NV--------------------------------------------------------------------------------EATSFDVLVDKTDMGSGWASETAALSETATPQIDRI---TIPLHELAAMPKASAFDIETWLANRIADKF---ARAEAAAFI--SGDG-VDKPTGFLSLGYVATGAAGDFAASDAVVDLVYALGYRANASFVMNSKTAGAVRKMKDADGRFLWADSL-PARLMGYPVLIAEDMPDIAANAYAIAFG--DFGNGY------TIAERLYASKRVGGDVSDFAAIKLLKF-A-------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |