>PF06670 (379 residues) MARALSLVALGLLFSLPPSSAVRTRVPGEDSFSPESGVLSGTDAPERRPNAMRTCVTTFC VRAVVPGLVEGNCGRLTVRNGLSVDETIKVTSAGWTKSERDFIVSLVADETRKVVQLRES EGASGASGPGPAPAEKPPSGQGSAEEAPKGEGGQEKPSVPLIAVRIHGSGGDKGESAPQS AVLLYGNDESEPTEVPLETAAGPTTPLMVLITQQNPKEVEVRVLAWISTEYLCSRRGVSR IFKYSDFCSLCRDATTGKGSWKENSVVVGSSLSGRDLTVNLSDCGPSSLRVYGSASADLV TVKEGMCEADDPELIALTRPHTSAASPLPAEEGDVAQDAQQSAGAQQEAEVQEVGEPQQE AAAAEQGSSAAESDTQQSS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MARALSLVALGLLFSLPPSSAVRTRVPGEDSFSPESGVLSGTDAPERRPNAMRTCVTTFCVRAVVPGLVEGNCGRLTVRNGLSVDETIKVTSAGWTKSERDFIVSLVADETRKVVQLRESEGASGASGPGPAPAEKPPSGQGSAEEAPKGEGGQEKPSVPLIAVRIHGSGGDKGESAPQSAVLLYGNDESEPTEVPLETAAGPTTPLMVLITQQNPKEVEVRVLAWISTEYLCSRRGVSRIFKYSDFCSLCRDATTGKGSWKENSVVVGSSLSGRDLTVNLSDCGPSSLRVYGSASADLVTVKEGMCEADDPELIALTRPHTSAASPLPAEEGDVAQDAQQSAGAQQEAEVQEVGEPQQEAAAAEQGSSAAESDTQQSS | |||||||||||||||||||
1 | 6fhjA | 0.09 | 0.07 | 0.74 | 0.81 | DisCoVER | -AEPV-KL--PITWPIIGDYVTGVTVFAQPEGSLSNVSANGIVLSPSDGVYTTTVSTSPYTERKVQIKGTDDSGFTTYSNTHFTVAPAHPLVNWYNQNGGTASYTRTTVDTRTVGKFAHTPAASKAKFQNNTKIRIAVAISSEVWLSNPTAGAYGEILIDEISA------------------------------VNTNSGTAPTLSATGVNASIGNQTVFTYTATYTDANNQAP--FDVQVVIDGIRSMTAADDTTYSDGRVYTYATTLPVG---THKFYFRTTDTTT-N--------------FVST----SVQTGPTVIRNNVPKGTYGGGGGGG------------------------------------------ | |||||||||||||
2 | 5k6lA | 0.08 | 0.05 | 0.60 | 0.67 | DEthreader | -----------VLLENLPLE---IFGRIQT-HY--YKSGTGDEGLWGTEPWSQRTAGEDKDFSDAYKL-E--MVVLLNV-GSLMDLVISEI--AYEINDYP-----------------STEN--------FG---D-----------PVRDYY--------VGYRYFETFEK--S-VRYPFGYG-----------ISYTENVAGKDVAQFYVSAQGKPKVLVAFKKTGILKEEK--ITVTV-PFDRF----------------------------TVYEGK--------------------------------NVRESYKEGSFTLNKASESVKYEDVPVSQRALREILKGFEIAVKEGGCKA-----NTMAMKRLCRN | |||||||||||||
3 | 2mpoA | 0.21 | 0.10 | 0.47 | 0.84 | CEthreader | ---------------------------------------------------------------TFLELVEVPCNSVHVQGVMTPNQMVKVTGAGWDNGVLEFYVTRPTKTGGDTSRSH------------------------------------------LASIMCYSKDIDGVPSDKAGKCFLKNEDSSEIDEKEVSLPKSHNDAFMFVCSSNDGSALQCDVFALD--------------------------NTNSSDGWKVNTVDLGVSVS-PDLAFGLTADGVKVKKLYASSGLTAINDDPSLGCKA--------------------------------------------------------------------- | |||||||||||||
4 | 5wyjBB | 0.05 | 0.04 | 0.89 | 0.77 | EigenThreader | LK-------------THQCIETHIAHTGEDDLDSQVKIWKLDIENDKMGGKLTE-------MGIFEKQSKQRGLFITNSSDKTKIKSASTTVSSSKL----ELVLTTSSNTIEYYSIPYEKRDPTSPAPLKTHTIELQGQRTDVRSIDDNKLNGSFECGYALTCKFLP-------GGLLV-ILGTRN---GELQLSEDAHDAAIWSLDLT---SDGK----RLVTGSADKTVKFWDFKVENSLVPGTKNKFLPELTDDILCVRVSISLLDNTHKLPVLSIDISFDSKMIITSSAD-KNIKIWGLDFGDCHKSLFAAVSSSHDHDMVLIAVNKTPEQYIMDTLLRIDALMSYVLKFLKFIDTVMQNKTLLHSHLPLICKN | |||||||||||||
5 | 2mpoA | 0.25 | 0.11 | 0.46 | 0.57 | HHpred | ---------------------------------------------------------------TFLELVEVPCNSVHVQGVMTPNQMVKVTGAGWDNGVLEFYVTRPTKT----------------------------------------GGDTSRS--HLASIMCYSKDIDGVPS-DKAGCFFSGEDSSEIDEVSLP-IKSHNDAFMFVCSSNDGSALQCDVFALDN--------------------------TNSSDGWKVNTVDLGVSVS-PDLAFGLTADGVKVKKLYASSGLTAINDDPSLCKA---------------------------------------------------------------------- | |||||||||||||
6 | 2mpoA | 0.19 | 0.08 | 0.43 | 1.12 | MRFsearch | ------------------------------------------------------------------ELVEVPCNSVHVQGVMTPNQMVKVTGAGWDNGVLEFYVTRPTK------------------------------------------TGGDTSRSHLASIMCYSKDIDGVPSDKAGKCFLKNFSDEKEVSLPIKS---HNDAFMFVCSSNDGSALQCDVFALDN--------------------------TNSSDGWKVNTVDLGVSVPDLAFGLTADG--VKVKKLYASSGLTAIND----------------------------------------------------------------------------- | |||||||||||||
7 | 2mpoA | 0.25 | 0.11 | 0.46 | 0.56 | FFAS-3D | -------------------------------------------------------------------LVEVPCNSVHVQGVMTPNQMVKVTGAGWDNGVLEFYVTRPTKT--------------------------------------GGDTSRSH----LASIMCYSKDIDGVPSDKAGKCFLKGEDSSEIDEKEVSLPKSHNDAFMFVCSSNDGSALQCDVFAL--------------------------DNTNSSDGWKVNTVDLGVSVS-PDLAFGLTADGVKVKKLYASSGLTAINDDPSLCKA---------------------------------------------------------------------- | |||||||||||||
8 | 5a9q1 | 0.10 | 0.09 | 0.93 | 0.65 | SPARKS-K | ---------------LERSFVLSGAERERPRHFREFTVCSIGTANAVAGAVKYSEAGGFYYVERNRFIHWKTSGDLMEESLDILNNAIRLKFQNYVSTQNRVIILMLTNQTPSRMYRSEKVDFTDPCNYQLIPAVPGISPNSTASTAWG-------EALFALIFVLKLPPYPGMVS-----VVELKQSSVMQRLLIRGDQSPSDRPLSLAVHCVDAFIFALCLRMWSYKEQMCVKGHKLRLAYSPTMGLYLGIYMHAPKRGQFCIFQLVSTNRYSLDHISSLFTSQETLIDFALTSTDIWALDANQTVEHNVAGQWNPVFMQPEEEIVIRDDQDPREMYLQSLFEALCKALQIFCRELKKEVTLAVENELQGSVTEYEF | |||||||||||||
9 | 2mpoA | 0.19 | 0.08 | 0.42 | 0.94 | CNFpred | ---------------------------------------------------------------TFLELVEVPCNSVHVQGVMTPNQMVKVTGAGWDNGVLEFYVTRPTKTGGDTSRS------------------------------------------HLASIMCYSKDIDGVPSDKAGKCFLKNFIDEKEVSLPIKS---HNDAFMFVCSSNDGSALQCDVFALDN--------------------------TNSSDGWKVNTVDLGVSVSDLAFGLTADGVKVKKLYASSG------------------------------------------------------------------------------------- | |||||||||||||
10 | 4r04A | 0.06 | 0.03 | 0.61 | 0.67 | DEthreader | -------------------------------------------------MSLIAAVSIVGIGEVTFLLPIAGISAGIP--LVNNELILHVYHLSESKKYGIDDLCNILISSHIPSLSIYAINDGTRLDSILYKFYWRFYAFFDY-------AITTLKPV-Y------------------------EDT---NIKIKL-D-KDTRNFIMPTITT-NEIRNKLSYSFDG-AGG---------------------------TYSL-LLSSY--------PISTNILLWIFNIDNEV---REISIENGTIKKGKLIKVGNQTLEINLVAK----------------YNPDTGEDISTSLTSLIVNIMSIDKKLSGYISN---- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |