>PF06630 (192 residues) GTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVV NELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLE DHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRL EMDTDNSYVQNL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | GTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNL | |||||||||||||||||||
1 | 1ja0A1 | 0.05 | 0.03 | 0.68 | 0.61 | DisCoVER | -GRNIIVFYGS-----QAEFANLSAYGM--RG--M-------------SADPEELKSLVVFCMATYGE-GDPTDNAQDFYLTGVKFAVF----------------GLGNKTYEHFNAMGKYVDQRLEQLGAQ--------RIFELGLGDDDGNLEEDFITWREQFWPAVCE--F-----------FGVEAT- | |||||||||||||
2 | 3hbjA | 0.07 | 0.05 | 0.77 | 0.67 | DEthreader | -------DAFFWAKWVPLWTAGHSGFPELKASDLPVIKDIVPFATLHKMGLLVISFATI---------------------KLLLNVGPFLTTPQRK---VSDGCLE-L----HENSSVV-YI----TPPPHELTALESECGFFVFLTSVCIVPMTEIGVGVDNGVLSIALELTMSEKGGIMRQKIVKL---- | |||||||||||||
3 | 6tgbA1 | 0.07 | 0.07 | 1.00 | 0.72 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFPEIIMPGDVRNDIYITLLQGDFDKYNKTTQRNVEVIMCDGKTLPNAICVGAGDKPMNEYRSVVYYQVKQPRWMETVKVAVPIE | |||||||||||||
4 | 4n0tA | 0.09 | 0.08 | 0.88 | 0.65 | EigenThreader | RELTTVLVKNLPKSYNKNFRFARIEFARYDGALAAIT------KTHKVVGQIIVSLTECPPSYTNVVALSIRL----PSLRFNTSRRVTS------KEDARYCVEKLNGL---KIEGYTLVTKVSNPLEKSKRTDSATLEGREIMIRNDENLLRESFEGFGSCCAFMVFNKDSAERALQMN----RSLLGNR | |||||||||||||
5 | 4krtA | 0.12 | 0.07 | 0.55 | 0.34 | HHpred | --KYAKQNYEGAKEQGLSVGFYHFFRANKG-AKQANFFIDEIGAVNY--DCKLALDIETTEGVGVRDLMCIEFLEEVKRLGEYPVWIAHYGVNTPGANNIQYSENGSVAGV--------------------------------------------------------------------------------- | |||||||||||||
6 | 3h9uC2 | 0.18 | 0.11 | 0.64 | 0.47 | MRFsearch | -------------------EVRWASCNIFSTQDHAAAAIAKRGIPVFA-----------------ETEEEYMWCMKQTLKDGYPNMLLDDGGDLTNYVLDECELDGKIYGVSEET-------------------------IPAMNVNDNSFCNQVLAQIELWKAQVYFLPKKLDEKVAALHLGK-------- | |||||||||||||
7 | 1s7eA | 0.13 | 0.09 | 0.73 | 0.37 | FFAS-3D | ------------------------EINTKEVAQRITTELKRYSIPQAIFAQRV--------LCRSQGTLS-------DLLRNPKPWSKL----KSGRETFRRMWKWLQEPEFQRMSALRLAACKRKEQEHGKDRGNTPKKPR---LVFTDVQRRTLHAIFKENK---RPSKELQITISQ-QLGLELSTVSN- | |||||||||||||
8 | 4dt1A | 0.09 | 0.07 | 0.80 | 0.74 | SPARKS-K | -----------MEYEDLELITIWPSPTKNKLCQFIKQNLSKEHV------VTQLFFIDATSSFPL-----SQFQKLV----------------PPTLPENVRIYENIRINTCLDLEELSAITVKLLQILSMNKINAQ-REPLKIILYINGLEVMFRNSQFKSSPRSHELLRDTLLKLRVMGNDENENASIRT | |||||||||||||
9 | 3o82A | 0.12 | 0.07 | 0.61 | 0.63 | CNFpred | ---EVAFFQLSGGSTGTPKLIPRTHN---DYDYSVRASAEICGLNSNT---RLLCALPAP------HNFMLSSPGALGVLH----------------------------------------------------------AGGCVVMAPNPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAA-QYKDQIQSL | |||||||||||||
10 | 6ar6A | 0.03 | 0.03 | 0.80 | 0.67 | DEthreader | -----IG-----KDYNVNVFYDAFIDVKNTYIEESLNKITQ-N-SG--NDVREFFYEQEL--RWNLAASDRISAIVIENY------LSAAEGSMIHLDIVEE--EE---INYIKDEF-VN-LN-P-LSLPIGAAEIKIGIMLQNIINSTKE-GL--FVSELIS----KVITKVNITLQDKTIKLKVNFQSNI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |