Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | FVFGIGGGGDIVSAIVVYTYLRKLGYNVLLGAVVWERYVEDPIPGPICFDDLRNAILVNQGLYKVNKDTYAIRGSRQVVPQLVRAIRALELEGAYGICNKSGAMGLYSSLKEFANTEKIDLIVGVDAGGDVLAKGCEETLGSPLIDFISLASLVKLEEDGYNVMLGVIGSGSDGELQYDYFLKRISEIASLNGLLDIKGYDRETATLVERVLNEVNTEASKIPFEAFKGLYGEIPIRNGTRNVFVTPVSAIMFFLDPIKVAETSPLYSLVKDSSSIDDANKNLNEVGIYTEYNFEIDL |
1 | 3ab7A | 0.08 | 0.05 | 0.66 | 0.62 | DisCoVER | | RILLATDGQARGAEALAEWLAYK--LSAPLTVLFVVDTRLELERALA-------------------------------GEVLERVRQSAAGVAVEAVLEEVPHEAILRRAR-A-------ADLLVLGRSDGF----------GGLGSTADRVLRAS----P-VPVLLAPLEGALLGYD------ASESA-VRALALAARAL---------------GLGVRVVSVHEDP-AEWALELRVEASALVLGGPGDLLALGA--PVRRL-V---F-------STA--E----RVIRN-AQGP- |
2 | 1q7tA | 0.11 | 0.07 | 0.69 | 0.83 | DEthreader | | LLFVHAHPDDESSNGATIAHYTSRGAQVHVVTCTLGEEGEVALTAD----LG------------------G-----YRIGELTAALRALGVSAPIYLRWRFADPQTVGALVAIIRELRPHVVVTYD--PNGGY--------GHPDHVHTHTVTTAAVAATVKFYWTVLGLLA-WVLPRADEIAFGYS-DD-GIDAVVE-ADEQARAAKVAALAAHATQ-VV--VGPTGR-AA-A-LS---NNLALPI-LADEHYVLAG---------------------------------------- |
3 | 3dm5A | 0.12 | 0.11 | 0.90 | 0.54 | CEthreader | | LMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR-----------PGAYHQLRQLLDRYHIEVFGNPQEKDAIKLAKEGVDYFKSKGVDIIIVDTAGRHKKALIEEMKQISNVIHPHEVILVI---------------DGTIGQQAYNQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLLGLGDIQGLLEKFKELEKEVEIKEEDIERFLRGKFTLK---DMYAQLEAMRKMGPISIGEERLKKFKVIMDSMTEEELLNPEII |
4 | 2v3cC | 0.11 | 0.09 | 0.82 | 0.55 | EigenThreader | | VILLVGISGKTTTAAKLARYIQKRGLKPALIAAD----TYRPAAYEQLKQLAEKIH-----VPIYGDETRTKSPV-----DIVKEGMEKADVLIIDTAGRHEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQ--------AGIQAKAFKEAV------GEIGSIIVTKLDGSAKG-----GGALSAVAETKAIKFIGIGEGID----------DLEPFDPKKFISRLLGMGDLESLLEKA-----EDMVD-----ELMTQLEAIYKVIISSIIKASRIRRIARGSGTTENDVREVLR |
5 | 2j37W | 0.15 | 0.13 | 0.85 | 0.33 | HHpred | | MFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRA--------GAFDQLKQATKARIPFYGSYTEMDP------VIIASEGVEKFKENFEIIIVDTHKQEDSLFEEMLQVANAIQPDNIVYVDAASVIVTKLDGHAKG---GGALSAVAA--TK---SPIIFIGTGEHIDEPFKTQPFISKL---------LG-----MGDIELIDKVNELKLDDNEALIEKLKHGQFTLRDMYMGSQILGMIPGFGTDEQESMARVFQPGRIQRVARSGVSTRDVQELLTQYTKFA-------- |
6 | 3zq6A | 0.12 | 0.07 | 0.63 | 0.38 | MRFsearch | | --GGKGGVGKTTISAATALWMARSGKKTLVIST---------DPAHSLSDSLETPTKITENLYAVEIDPEVAMPGIDEAAAFDQFLRYMTTYDIVIFDTAPATKKQINAAREVMSDPERTSFKMVVIP-------------EEMSIYESERAMKALEKYSIHADGVIVNQ---CNARRKLQQERLKQIREKDKVVAEVPLEAKGIETLEKIAEQL----------------------------------------------------------------------------------- |
7 | 3nvaA1 | 0.16 | 0.13 | 0.84 | 0.59 | FFAS-3D | | YIVVTGGGKGTLVAS-IGMLLKRRGYNVTAVKID---PYINVDAGTMNPYMHGEVFVTEDGAETDLDDVNMTKYNNITAGKVYFEVIKKEREGKYLGQTVQITDQIKDMIRYASKINNAE-ITLVEIGGTV---GD-------IESLPFLEAVRQLKLEEGEDNVIFVHLSVTGELKTKPLQHSVQELRRIGIGRATLPLDDETRRKIALFTNVKVDHI-----------------------VSSYDVETS---YEVPIILESQKLVSKIDRQVDLTDWISFVNNIKGINS------- |
8 | 6nzjA | 0.16 | 0.13 | 0.78 | 0.54 | SPARKS-K | | AIYGKGGIGKSTTTQNLTAALSTMGNNILLVGCTRMLLGGLNQKTVLDTLRSEGLQPGFGGIKCVES-GGPEPGVGCAGRGIITSIGLLELGAFYDVLGDVVCGGFA----MPIREGKAKEIYIVASG----------ELMAIYAANNICKGLAKFAKGGARLGGIICNS-----RKVDGERELLEAFAKKGSHLIHFVPRDNIVQRAEIVIDFDR---------------------------------------ESDQAKEYLTLADNVQNPTPLEELEAMMVEFGIVEL------- |
9 | 1fszA | 0.11 | 0.08 | 0.79 | 0.81 | CNFpred | | TVVGCGGAGNNTITRLKMEGIE--GAKTVAINTDAQQLIRTKA---------DKKILIGKKLTRGGAGGNPKIGEEAAKESAEEIKAAIQDSDMVFITCG-TGTGSAPVVAEISKKIGALTVAVVTLPFVME---------GKVRMKNAMEGLERLKQ-HTDTLVVIPNEKLVPNMPLKLAFKVADEVLI------------NAVKGLVELITKD-ADVKAVMNNGGLAMIGIGESDS-SPLLDVD-TGALIHVMGPEDL--------------TLEEAREVVATVS----------- |
10 | 1q7tA | 0.11 | 0.08 | 0.70 | 0.83 | DEthreader | | LFVHAHPDDESLSNGATIAHYTSRGAQVHVVTTLGEEGEVAQLTAD----QL-----------------GG-----YRIGELTAALRALGVSAPIYLWRRFVAPQTVGALVAIIRELRPHVVVTYD--PNGGY--------GHPDHVHTHTVTTAAVAAGVKFYWTVLGLIA-WVLPRADEIAFGYS-DD-G-IDAVVEADEQARAAKVAALAAHATQVVVG-PT-GR-A---A-ALS--NNLALPI-LADEHYVLAG---------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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