>PF06621 (293 residues) AGSLTENCRTPKSRVSRPKTKARLSPYTQYPSFQTERSESDQDSPWGSSPLTDSASPQLL EQGEGLDASCVYRQFPDPRPRCYSLSDEHHHATSDGYTHLHGQGQSCERGRCEAGRYFLG APPTGREAWWGTARSVLPLSKSSLENHDGYDSSAPHITAIHSYNGRGHWDEDSVVSSPDG GSASDSGDRYQADHYRCSPQEPSKIETLIRATQQMIKEEESRLQLRKGPPDAPLGPANGL PKGPGPCFTPEYTQGPLPLQTVVCRGPSQAISPAPSPAPLSRLSSPGPERLHK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | AGSLTENCRTPKSRVSRPKTKARLSPYTQYPSFQTERSESDQDSPWGSSPLTDSASPQLLEQGEGLDASCVYRQFPDPRPRCYSLSDEHHHATSDGYTHLHGQGQSCERGRCEAGRYFLGAPPTGREAWWGTARSVLPLSKSSLENHDGYDSSAPHITAIHSYNGRGHWDEDSVVSSPDGGSASDSGDRYQADHYRCSPQEPSKIETLIRATQQMIKEEESRLQLRKGPPDAPLGPANGLPKGPGPCFTPEYTQGPLPLQTVVCRGPSQAISPAPSPAPLSRLSSPGPERLHK | |||||||||||||||||||
1 | 4aalA | 0.06 | 0.04 | 0.71 | 0.72 | DisCoVER | -------VMKRAQGLFKPIPAKPPVMASRVELGRMLFFDPSHLISCNTCHNVGGTDILETSIGHGWKGPRNSPTV---LNAVYNIAQFWDGRAEDLQAPVQLFANVAKAIEVFEATLVTPLACHSGVNMGGTGYFPFGVREDPGPVDTGRYKVTSDKYVFRSP--SLRNVA-IT---------------MP--YFHS----G-KVW--------------------------KLKDA-----VKIMGSAQLGISITDADADKIVTF----------LNT-LTGAQ-------- | |||||||||||||
2 | 3fawA | 0.07 | 0.05 | 0.70 | 0.67 | DEthreader | NLGPY-KSPLGQNLSFAKIFDAVIYEA-----HV-RDFTSDQSLDLQLGAEKLDY-------------------------HIQL-LPVLSYFYVNEMQSGMYSRIELKQL-IHDIHKRGMGVITVDGFRMIMIGVFSDIRLSGFPNETAGINPVVQYAAIHQEYGRAATDNNK-------QA-TA-------------------G--ITLRRSTDFRKLKID-EVSLITEQVIAYQTIDGDIYAVFVYHLLKGQV-VDADQ-A-GIKPIP-----A----------------- | |||||||||||||
3 | 1vt4I3 | 0.09 | 0.09 | 1.00 | 0.74 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 7kdtA | 0.06 | 0.06 | 0.99 | 0.55 | EigenThreader | AKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPYECSKEIDAEGKYMAEALLLRATFYLLIGNANAAKPDLDKVISLKEANVKLRANALIKRGSMYMQQFNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKFPRCAEGYALYAQALTDQQQFGKADEMYDKCIDLETTYVHKGLLQL----QWKQDLDRGLELISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAH | |||||||||||||
5 | 5gooA2 | 0.15 | 0.03 | 0.19 | 0.28 | HHpred | ------------------------------------------------------------------------------------YRYKGNEFGK---EIANKFNIFSQSIPPEKGGYLAGNLGPGRDFRFFALG-NL-AILAGL----------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2pffB | 0.11 | 0.04 | 0.33 | 0.63 | MRFsearch | ------------------------------PDDDYGFKQGGGGGGGGGGGG-----------------------------------------------------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQGSQEQGM--------GMDLYKTSKAAQDVWNRADNHFK--------------------------------------------------------------------- | |||||||||||||
7 | 3cnfT | 0.12 | 0.11 | 0.93 | 0.50 | FFAS-3D | -SINNDTRVALDPKPNQIRTTLRLLGPFQYFNFSETDRGHPLFRLPLKYPSKAIPADELIDNLHSWMRSVHLLHVSEDNTLRYNWMLGVYARSTNYTTPVGQLVVNAPA--------ILNYSNPQDAFNWHAPTMALMRKSTLVSTHSSWHWDVLHTFHYRSESDMIDHFAAKILEDWRQKGALVEADRLSSSTYVQRLAAISRLSTALLQLSDTYNDQLRRLYRRMYNDSRTLYMTQRHQELLLAQITADPNILLYPY----------TYIFTTAYTSMNYISNTGQGRI-- | |||||||||||||
8 | 6ybt2 | 0.08 | 0.07 | 0.88 | 1.06 | SPARKS-K | NVWYSVNGERLGTYMGHTGAVWCVD-------ADWDTKHGSADNSWDCETGKQLALLKT-----NSAVRTCGFDFGGNIIMFSTFVSFFDLRDPSQIDNNEPYMKIPCNDSKITSAVWG---PLGECIIAGHESGELNQSGEVLVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQKTFRTERPVNSAALSPNYDHVVLGGG------------QEAMDVTTTSTRIGKFEARFFHLAFEEEFGRVKGHFGPINSVAF-------HPDG-KSYSSGGEDGYVR | |||||||||||||
9 | 2zxqA | 0.07 | 0.05 | 0.72 | 0.67 | DEthreader | ------------TQKPGAASPSVLWRIA----ANPFLTTL---------DNVKKVANTDG----------LGQSV---LLKGYGNGHDYAKAFSEDMV--------L------IYLTTEHWDYGGYKGDYGHVSKFQHFKDSN--G---NVVVVIT-V-AGDGSATGHWNYQLTD--QG---------KTNEQTYVVYEAKQIQVNWDFNGGTVNAMLVGVDFQNMYVFILTNGFENN-QGI-----WPFVVSDNRNGLTSGSKALETGK--GIYS-TATA-P-DLQGSGYKD | |||||||||||||
10 | 6etxG | 0.07 | 0.07 | 1.00 | 0.88 | MUSTER | KNLVMQFRKVCNHPELFERQETWSPFHISLKPYHISKFIYRHGQIRVFNHSRDRWLRVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLIT | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |