Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | MSILGLQGVRGGVGTTSITSALAWALQILGENVLVVDASPDNLLRMSFNVDFAHRDGWARALLDGKDWRDAGLRYTTQLDLLPFGQLTVEERENPQEWAEKLGAICAGLRELKESRRYSWILLDLPQGVSPLTQQLVSLCDHTLAVVKADTNCHIRLHQQALPTGAHILINDLRIASQLQDDLYQVWLQSQRRLLPMVIHRDEAMAECMASKQPLGEYRGDSLAAEEVLTLANWCL |
1 | 6iubA | 0.18 | 0.18 | 0.99 | 1.50 | DEthreader | | SEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDFDPQANATSSLGFRRKIDYDIYHVLIGRKQISQVILKTMPFLDLVPSNGLAGFEKTFYDSQKRGELMLKNALESVVG-L-YDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFALEGTKLNTIRKIRGFLPTMHVPQLNLTKGVLAELFKYFDSEFFIMIPKSVKLAESPSFGKPILLYDIKSNGSIAYQKLAQSIL |
2 | 6iubA | 0.18 | 0.18 | 0.99 | 4.23 | HHpred | | SEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDFDPQANATSSLGFRRDKDYDIYHVLIGRKQISQVILKTMPFLDLVPSNLLAGFEKTFYDSQDRGELMLKNALESV--VGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFALEGTKLLTKLKIRGFLPTMHVPQLNLTKGVLAELFKYFDSEFRIMIPKSVKLAESPSFGKPILLYDIKSNGSIAYQKLAQSIL |
3 | 1hyqA | 0.18 | 0.17 | 0.94 | 0.88 | DisCoVER | | VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITANLELILGMEG-LPVTLQNVLAGEARIDEAIYVGPGGVKVVPAG-V---SL--EGLRKANPEKLEDVLTQIM--ESTDILLLDAPAGLERSAVIAIAAAQELLLVVNPITDGLKTKIVALGTKVLGVVVNRITTLEMAKNEIEAIL--EA--KVIGLIPEDPEVRRAAAYGKPVVLRSPNSPAARAIVELANYI- |
4 | 4rz2A | 0.14 | 0.14 | 0.97 | 0.52 | MRFsearch | | -RTIAVTSGKGGVGKSNVSLNFSLSLSKLGFRVLLLDMDIMGNIDILLGESSS--LALADWFSARLPLSELVKSGPEHLSYIAGGTGAAQWQG---LDTASIDRFLTELQAVASQ--YDYLIFDMGAGASGERLYFLKSVDDVFVVTTPEPTAMTDAYAMMKYAPFSVIVNRAGEGYEVFERLKHVTGRFLNIALLGIIPEDRTVARAVVSQTPFVLLDPAAKASKAVRQMAFRYA |
5 | 1hyqA | 0.19 | 0.18 | 0.95 | 1.46 | SPARKS-K | | VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITANLELILGME-GLPVTLQNVLAGEARIDEAIYVGPGGVKVVPAGVSLEGLRKANP------EKLEDVLTQIMES--TDILLLDAPAGLERSAVIAIAAAQELLLVVNPEISSITDGLKTKITKVLGVVVNRIT--TLGIEMAKNEIEAILEAKVIGLIPEDPEVRRAAAYGKPVVLRSPNSPAARAIVELANYIA |
6 | 3q9lA | 0.18 | 0.17 | 0.94 | 1.00 | MAPalign | | ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAILRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDTENLYILPASQTRD--------KDALREGVAKVLDDLKA-MDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRIILI-KEHLLLTRYNVSRGDM--LMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDI-NADAGKAYADTVERLL |
7 | 6iubA | 0.18 | 0.17 | 0.99 | 0.74 | CEthreader | | SEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDFDPQANATSSLGFRRKIDYDIYHVLIGRKQISQVILKTQPFLDLVPSNLGLAGFEKSQDENKRGELMLKNALESVV--GLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFALEGTKLLPKLKIRGFLPTMHVPQLNLTKGVLAELFKYFDSEFFIMIPKSVKLAESPSFGKPILLYDIKSNGSIAYQKLAQSIL |
8 | 1hyqA | 0.19 | 0.18 | 0.95 | 1.42 | MUSTER | | VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITANLELILGME-GLPVTLQNVLAGEARIDEAIYVGPGGVKVVPAGVSLEGLRKAN------PEKLEDVLTQIMES--TDILLLDAPAGLERSAVIAIAAAQELLLVVNPEISSITDGLKTKITKVLGVVVNRITTL--GIEMAKNEIEAILEAKVIGLIPEDPEVRRAAAYGKPVVLRSPNSPAARAIVELANYIA |
9 | 1hyqA | 0.18 | 0.17 | 0.95 | 1.51 | HHsearch | | VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITANLELILGMEG-LPVTLQNVLAGEARIDEAIYVGPGGVKVVPAGVSLEGLRKA------NPEKLEDVLTQI--MESTDILLLDAPAGLERSAVIAIAAAQELLLVVNPEISSITDGLKRLGTKVLGVVVNRITTLGI--EMAKNEIEAILEAKVIGLIPEDPEVRRAAAYGKPVVLRSPNSPAARAIVELANYIA |
10 | 6iubA | 0.17 | 0.17 | 1.00 | 2.24 | FFAS-3D | | MEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDFDPQANATSSLGFRRDKDYDIYHVLIGRKQISQVILKTQMPFLDLVPSNLGLAGFEKTFYDSQDENKRMLKNALESVVGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFALEGTKLNPKLKIRGFLPTMHVPQLNLTKGVLAELFKYFDSEFYIMIPKSVKLAESPSFGKPILLYDIKSNGSIAYQKLAQSIL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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