Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | VGLTIWRLPGGGFAVGRFSGGRRAGERELPVVYTEMDGGFNNSGAPRRISWASRRSRSRESGGSLGRAFRNIFSFLGRFRSSSSSSSRSTSEPGSITRSHSHSSSVFSRYVR |
1 | 4ri0A3 | 0.06 | 0.04 | 0.58 | 0.65 | DisCoVER | | --LLG-HSADLEFVVAIG------SPFNTVTTGIVSTDYI-----QTDAIINYG-----NAG--G--PL--VNLEVIG---------------------INTLKVISFAIP- |
2 | 4eqvA | 0.08 | 0.06 | 0.83 | 0.83 | DEthreader | | NDNGSKVFWYE-IMTAIFAEGFLGYQYE-CPGLIEVPSYW------V-MFISINPAPAGFGKDYYA--L--QTFFNTSLGISLILNI-AGPWSRTFEYGLYDGD-----VVS |
3 | 1uynX | 0.07 | 0.07 | 1.00 | 0.61 | CEthreader | | QTQQDGGTVEGKMRGSTQTVGIAAKTAAATLGMGRSTWSENSANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGTLMQLGALGGVNVPTGD |
4 | 4h3sA | 0.04 | 0.04 | 1.00 | 0.62 | EigenThreader | | NGKAYVCHKPGEAILRMKQDLNSPSPQMWDLIAYRVLNAPHPRTGWRIYPTYDFTHCLVDSMENWLCDQVGTKIAQLVDEKFVRGWDDPRLFTLEAIRRRGVPPGAILSFIN |
5 | 3gk6A | 0.10 | 0.04 | 0.37 | 0.25 | HHpred | | SESVKTKVSSGKYVTFSATGEP----QVVIDLWNEVWNYFA-CPHK------------------------------------------------------------------ |
6 | 6lvbA2 | 0.17 | 0.06 | 0.38 | 0.52 | MRFsearch | | --ITYFSTANGGGMFATS-----------------------------SISWLGS-------DNNVSKMTKNVLNQFIKDE-------------------------------- |
7 | 2bhvB | 0.14 | 0.12 | 0.81 | 0.30 | FFAS-3D | | -------IPKGSKVIGYYSNNNKMGEYRLDIVWSRI-------ITPHGINIMLTNAKGNGLVGELIERNFQRYGVPLLLSTLTNGLLIGITSALDYLLMQLMRQS------- |
8 | 3bogA | 0.20 | 0.13 | 0.68 | 0.90 | SPARKS-K | | DGAHGVGCPGTA---GA-AGSVGGPGCDGG---HGGNGGNGNPGCAGGVGGAGGASGGTGVGGRGGK----------GGSGTPKGADGAPGAP------------------- |
9 | 1q3xA | 0.28 | 0.09 | 0.32 | 0.60 | CNFpred | | -GALVFLDSERWFVGGIVSWGSNCGEAGQYGVYTKVI--------------------------------------------------------------------------- |
10 | 5ez3A2 | 0.07 | 0.06 | 0.94 | 0.83 | DEthreader | | LRLAVAGMRMALVALSRLA-AF--AAAFARTPVKVCKIAPLL-AEAVN-WEGVMLDVARLSRAPLFDG-VLDWIS-QLGGGTDVLRALQTETDQGVALLTEQLFAAELLGAD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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