>PF06546 (267 residues) YSGSNLYSPDSSANSGPIISDVTELAQSSPSASPSGSLDERSSPVVRIKEEPPSPSRSPK IEEASPGNPPAVETPLSPSTFIDSILQENEPSTTTAAAGNSTTQPQPQEKCLSVACLDKN ELNDHLDTIDSNLDNLQTMLTTHGFSVDTSALLDLFSPSMTVTDMNLPDLDSSLASIQDL LSSQEQQKPTETEASTADTGKQLVHYTAQPLFLVDSSAVDVGSGDLPIFFELGEGPYFTD GDEYAEDPTISLLSGTEQAKPKDPAVS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | YSGSNLYSPDSSANSGPIISDVTELAQSSPSASPSGSLDERSSPVVRIKEEPPSPSRSPKIEEASPGNPPAVETPLSPSTFIDSILQENEPSTTTAAAGNSTTQPQPQEKCLSVACLDKNELNDHLDTIDSNLDNLQTMLTTHGFSVDTSALLDLFSPSMTVTDMNLPDLDSSLASIQDLLSSQEQQKPTETEASTADTGKQLVHYTAQPLFLVDSSAVDVGSGDLPIFFELGEGPYFTDGDEYAEDPTISLLSGTEQAKPKDPAVS | |||||||||||||||||||
1 | 3iygB1 | 0.07 | 0.04 | 0.55 | 0.52 | DisCoVER | ----------------LEAIHV-------------IKKLGGSADSYLD-EGFL-L--DK-K--IGVNQPKRIENAKILI-AN-TGM-----DTEKEKMKEKV-----ERIHICFINR----QL--IY--NYPEQL----FGAAGVMAIEHADFGVERLLVTGGIASTFHPELVKL----GSC----KLIE-EVMIKLIHFSGVALGEACTIVLRGA--------------------------------------------------- | |||||||||||||
2 | 3bkkA2 | 0.09 | 0.06 | 0.69 | 0.67 | DEthreader | -----------------------WRGRIYPKYVLIAANSWRSMYELELEFEQPLYNLHYVRRLIPIPAHLLGN-AQTWSNIY----DTTEAMM-KEAFFPVPFKSMKVVCHA---KQCTTDVAHHEMGGDVLALSVSTPFLMKMALD-KIAFIPFS---Y--------VDQWRWRVYNQEWWSLRLK----------YQGL---------------FHIPS-SVPYRYVSFIIQ--------------PWPEAMQITQSAMSKPLLW | |||||||||||||
3 | 2mprA | 0.04 | 0.04 | 1.00 | 0.48 | CEthreader | GPGAGIENIDLGFGKLSLAATRSTEAGGSYTFSSQNIYDEVKDTANDVFDVRLAGDYGRANTTDGYKLADGASKDGWMFTAEHTQSMLKGYNKFAMTTQGKGQARGSDGSSSFTEKINYANKVINNNGNMWRILDHGAISLGDKWDLMYVGMYQNIDWDNNLGTEWWTVGVRPMYKWTPIMSTLLEVGYDNVKSQQTGDRNNQYKITLAQQWQAGDSIWSRPAIRIFATYAKWDEKWGYIKDGDNISRYAAATNSGISTNSRGDSDE | |||||||||||||
4 | 3zyzA | 0.09 | 0.09 | 0.96 | 0.48 | EigenThreader | VAGPLGKTPQGGRNWEGFKHYILNEQELNREYTWPFADAVQANVASVMCSACEDQYTLQTVLKDQLGFPGWNAQHTTVQSANSG---LDMSMPGTDFNGNNRLWGPALTNAVNSNQVPTSRVDDMVTRILAAWYLT-------GIAVVGSAAIIGNHARGALGFVAPYDAINTRASSSSGASAARDSGEGYITVEGNAGDRNVVVHSVGAIVVWAGLPSQESGNALVDVLWGDVSPSGKLVYTIAKLFIDYKHPRYEFGYGLSYTKF | |||||||||||||
5 | 2btvB2 | 0.15 | 0.10 | 0.69 | 0.36 | HHpred | ----------------------VDFTVPDVQQILDDIKALAEQVYKIVKVPSTSFRHIVQSRDRSQVGD--VITEDEPEKFYSTIIRGKGSFILHDIPAKTAEHRANVATRFIGACSERNRLQGYIEAVQNSIGWLERLGQRKRITYSQEVLTDFRRQDMIVLALQLPV-RNEMLEIAPLIESVY---ASE---------LSVMKVDMRHLSLMQRRFPDV---------------------------------------------- | |||||||||||||
6 | 2rltA | 0.24 | 0.06 | 0.27 | 0.48 | MRFsearch | ----------------------------------------------------------------------------------------------------GGSPGGLQKRHARVVKYDRRELQRRLDVEKWIDGRLEELYRGRPDEVNIDELLELE------------SEEERSRKIQGLLKS------------------------------------------------------------------------------------ | |||||||||||||
7 | 4bmlA | 0.10 | 0.09 | 0.90 | 0.44 | FFAS-3D | ------LVRSYDLRGGMFTGKLSAGYHTPGTPIVGDAGIKANEKTLVMDDLLVSSQFVYSLDEIFSQYSTRAEVSKQIATHYDERIARVLAKASAEASPVTGEPGGFHVNIGAGNTNDAQAIVD-------GFFEAAAVLD---------------ERSAPQEGRVAVLSPRQYYSLISSVDTNILNREIGNSQGDMNSGKGLYSIAGIRILKSNNLAGLYGQDLSSAAVTGENNDYQVDASALAVAPTIQTTSGDFNVQYQGDLIV | |||||||||||||
8 | 5jcss | 0.13 | 0.12 | 0.97 | 0.86 | SPARKS-K | ILGPRVFSMNSDIDS----MDILEQVDLTRQISYITEELTNIVREIINMKLSPNATAIMEGLNLLNNIVTPEKFQDFRNRFNRFFSHLEGHPLLKTMSMNIEKMTEIITKEASVKILDNANLCSPLDRLNSLLEIDGSLLINQPRVLKPHPNFRLFLTMDPKYEIYIDELHSRSTAFDRLTLGFELGENIDFVSIDDGIKKIKLNEPDM---SIPLKHYVPSYLSRPCIFAQVHDILLLSDEEPIEESLAAVIPISHLGEVGKWANN | |||||||||||||
9 | 2x49A | 0.15 | 0.06 | 0.40 | 0.60 | CNFpred | ------------------------------------------------------------------------------YHCLAVTLARN-----------------------VNEYFGIQETKHMLDQLEAFPDLLKEVLRHATVQRISEVLQRLLSERVSVR-----NMKLIMEALALWAPREKDVINL-VEHIRGAMARYICHKFALRAVMVS---------------------------------------------------- | |||||||||||||
10 | 6zymA | 0.05 | 0.04 | 0.81 | 0.83 | DEthreader | VMHDLDMMPEGIKQNKTIHLARCANILQ-Q--YLGPIAEAVAVYTT--------AMVPVYDVE----EKITDAD-LW--ADRLFPPLLLIVIAMTAKNV---------IYYLVMDLLLLHRASEMAG-PPQM--PN-DFL----CRY-DRIH----GYNNVGRVSVYNPNLLFCRFLRVDVTQELLDLLVKCENKQTKMPSRFINRAGIFWQHE-V-QKE-TIHPRKSYLRDLAYNLHSQQMAKIMANALYVLRERIR--------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |