>PF06529 (332 residues) SSTAYAQEIQKLSNSTAVYFQDYQTSKSNVSSFVDEHEPSMVASSCISVIKHSPQSSLSD VSEVSSVEHTQESSVQGSCRSPENKFQIIKQEPMELESYTREPRDDRGSYTASIYQNYMG NSFSGYSHSPPLLQVNRSSSNSPRTSETDDGVVGKSSDGEDEQQVPKGPIHSPVELKHVH ATVVKVPEVNSSALPHKLRIKAKAMQIKVEAFDNEFEATQKLSSPIDMTSKRHFELEKHS APSMVHSSLTPFSVQVTNIQDWSLKSEHWHQKELSGKTQNSFKTGVVEMKDSGYKVSDPE NLYLKQGIANLSAEVVSLKRLIATQPISASDS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | SSTAYAQEIQKLSNSTAVYFQDYQTSKSNVSSFVDEHEPSMVASSCISVIKHSPQSSLSDVSEVSSVEHTQESSVQGSCRSPENKFQIIKQEPMELESYTREPRDDRGSYTASIYQNYMGNSFSGYSHSPPLLQVNRSSSNSPRTSETDDGVVGKSSDGEDEQQVPKGPIHSPVELKHVHATVVKVPEVNSSALPHKLRIKAKAMQIKVEAFDNEFEATQKLSSPIDMTSKRHFELEKHSAPSMVHSSLTPFSVQVTNIQDWSLKSEHWHQKELSGKTQNSFKTGVVEMKDSGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDS | |||||||||||||||||||
1 | 6y3yA | 0.04 | 0.04 | 0.82 | 0.70 | DisCoVER | VVSHLNHDWFLFGDSRSDKISSSAGD--SIFKSFHFTRFYNYTGEGDQIIFYEGVNFNPYHRFKCFPNGSNDVWLLNKVRFYRALYSNMAFRYLTFVDISKFNSCKSDILSLNNPIFINYKEVYFTLLGCSLYLVPLCLFKSNFSQYYYNVYGFSNVVYPDLDCIYISLKPGVFLSLPTKALCFDKS------------K--QFVPVQVVDSRWNNERLSVACQPYCYFRNSSANYVGKYDINHGDSGFISILSGL-------------------------LYNVSCISYYGVFLYDNF-TSIWPY--------------YS--FGRCPTS- | |||||||||||||
2 | 1vt4I3 | 0.04 | 0.04 | 1.00 | 0.95 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
3 | 5xybA | 0.06 | 0.05 | 0.87 | 0.58 | EigenThreader | EFSSIVNIVKSQYPDREYELMKDYCLNLDVKTKAARSALEYADANM---------FFEIEDVLIDSMISCSNMKSKEYGKVYKIHRELSNSVFSRLLLLYHYLSTGNFSPMAQLIKQ---IDLSEISENMYIRNTYQTRVHVLMSNIKLNENSLEECREYSKKALES-------------------TNILRFQVFSYLTIGNSLNMIFQQALCFLNNVWRKENKWINSIMDLQEQAHCFINFNEEVLDKLDLL------VHNDNELAMHYYLKGRLEQNKACFYSSIEYFKKSNDKFLIRLPLLELQKMGENQKLLELLLLL---EHH---- | |||||||||||||
4 | 6tgbA1 | 0.16 | 0.07 | 0.45 | 0.36 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGFPEIIMPGDVRNDIYITLLQGDFDKYN-----KTTQRNVEVIMCVCAEDGPNAIGDKP--MNEYRSVVYYQVKQPRWMETV-----KVAVPIEDMQRIHLRFMFRHRSSLESKLHDGF-HDLVVLKGDSKKM-EDASAYLTLPSYRHHVEVSSRDVFS---------- | |||||||||||||
5 | 2ychA1 | 0.16 | 0.05 | 0.27 | 0.43 | MRFsearch | --AALAQEIKELLLE---------------------------KRYVVTALS----------------------------------------------------------------------------------------------------------------------------NLAVILRPIQVPKPLKEEEAVRWEAERYEVVLDFAPLTPLSEVQ------------------------------EGEQVQVVA--------------------------------------------------AARQEAVAGVLEALRG-------- | |||||||||||||
6 | 2xd8A3 | 0.15 | 0.10 | 0.63 | 0.35 | FFAS-3D | ----------------------------------------------------------------------------------------LKLFSGEMKGFQHETIARDLVTKRTL----------KNGKSLQFIYTGRMTSSFTPGTPILGNADKAPPVAEDDLLISSASATNFVEPGGTQSGTNESDAFTASALVNAFYDAAAAMDEKLGKYGVKYGGTTGETSPGNLGSHIGPTPENANATGGVNNDYGTNAELGAKSCGLIFQKEAAGVVEAIGPQ--------VQVTNGDVSVIYQGDVILGRGADYLNPAAA---------------- | |||||||||||||
7 | 5h7iC | 0.07 | 0.07 | 0.93 | 0.88 | SPARKS-K | DEEQLLPVVRAILLQHDTFLLKNYANKAVLDALLATKDLPDFDA------NFTGTLPLEDDVWLEQYIFDTDPQLRFDRKCRNESLCSIYSRLFKLGLFCVKSVVSSAELQDCISTSHYATKLTRYFGVLTIFPCAKAIRYKPSTMATTDNSWVSIDE-PDCLLFHTGTLLARWSQGMHTTSPLQIDPRANTIWPSILRLQVKELFTVCETVLSLNALSRSTGVPPELHVLLPQISSMMKRKIVQ--------------DDILKLLTIWSDAYVVELNSRG---ELTMNLPKRDNLTTLTNKSRTLAFVERAESWYQQVIASSQRQKRYQQF | |||||||||||||
8 | 5f9yA | 0.06 | 0.02 | 0.34 | 0.32 | CNFpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VIIIPIIFVITEEQKKICNEVECILKKAGVRVKIDDR-----------SNYTPGWKYNHW--------EVKGVCLRFEVGP-------------RDIEK--------RSVRVVVR---NMEKMDIPISELESKIPKLLEEFQNRLLFKAKQRQNE | |||||||||||||
9 | 1st6A | 0.08 | 0.06 | 0.73 | 0.67 | DEthreader | -TTTEDQILKRDMP-PAFIKENTVRAQMLPARYLDGSGILSGTSDLLDEVRIRVCKGILEYLTVAEVVDLTYTKNLGGMLLPVLIVMEIEIIRVLDEDA-ACAGKEREIAKVE-AA-RKLEAMTNSKQ---KAAVHLEG----------------------------KIEQAQ---GVAGLAERLANVMMGPYRDLMEAMEVTAEAAGTAN------------KTTVEGIQATVARELTPQ---------LVDEAIDS---AKWSSNDIIA-A-----A-KRMALLMCAKDIAKASEVLMVKEVREAEA-SI-------------------- | |||||||||||||
10 | 4bujB | 0.10 | 0.10 | 0.97 | 0.64 | MUSTER | ATNHY-VSAAKLVPDNLLAWKGLFLLFRTTEVVPDILSYDEYFDLCGQYADALLKQEQVELINLLKKTHPDCQKAFYQHLKPGSLMETIGRTPQDA-KILSNIETTEIGKTLSQNRLKLKASDPDY--QIKLNSFSWEIIKNSEIDQLYNQLVNILADDQKRSEIENQWLEYRIKVLKS------MPLDVKKDFFTKVKEMVEDMLVNHQSLLAQKYFEWTDYEDLDNMDAPLIIFKKFPKDPLAMILYSWLSSKLSKYDIKSLESDDIEIGLLEEEVVTVLTENIVKCKNNILAHRILCQYYLLTKYEAALPYIKNGISLIAYNIKDLGVH | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |