>PF06495 (191 residues) MDADSSSRSPRDTRTCARPKEKVPYFADEGRERDRVRNLRHRKTSITRPTTSHRGRPMRA RSRSYSAERNCCQRRRRSRSCERRHSDTRHKLTTATVTKQRRRRSRSRSRSRSRTPRIIT VPVPVPAADYPYAYAWPPPPQAPQFNPMYGAVPYGMPSRPVYPAHPYFAPYPRPRLTFPY RAPPFRPHPRF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MDADSSSRSPRDTRTCARPKEKVPYFADEGRERDRVRNLRHRKTSITRPTTSHRGRPMRARSRSYSAERNCCQRRRRSRSCERRHSDTRHKLTTATVTKQRRRRSRSRSRSRSRTPRIITVPVPVPAADYPYAYAWPPPPQAPQFNPMYGAVPYGMPSRPVYPAHPYFAPYPRPRLTFPYRAPPFRPHPRF | |||||||||||||||||||
1 | 1mv3A | 0.04 | 0.02 | 0.55 | 0.97 | DisCoVER | ---------------------QLRKPPVPPPPKHTPSKGTVEGGSGAGRLDLPPGFMFKVQA--------------------------------------------------QHDYTATDTDELQLKAGDVVLVIPF-----QNPEEQDEGWLMGVKESDWNQHKKLECRG-VF-----PEN-FTERV--- | |||||||||||||
2 | 6tjhA1 | 0.08 | 0.07 | 0.97 | 0.56 | CEthreader | AIEASPVIGEDGTIYVGSNDGHLYAINPDGTEKWRFKTGKAIEASPVIGEDGTIYVGSNDGHLYAINPDGTEKWRFKTGKAIEASPVIGEDGTIYVGSNDGHLYAINPDGTEKWRFKTGKAIEASPVIGEDGTIYVGSNDGH-----LYAINPDGTEKWRFKTGKAIEASPVIGEDGTIYVGSNDGHLYAI | |||||||||||||
3 | 4ui9J | 0.04 | 0.04 | 1.00 | 0.52 | EigenThreader | AQCLYLTAQYHRAAHALRSRKLDKLYEACRYLAARCHYAAKEHQQALDVLDMSQSSIKSSICLNRTLATYSYKEALKLDVYCRHYYNCDFKMCYKLTSVVMEKDLNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSEHDQAMAAYFTAAQLMKGCHL | |||||||||||||
4 | 5sydA | 0.11 | 0.03 | 0.29 | 0.27 | HHpred | ------------------------------------------------------------------------------------------------------------------EKDSVTFDVSKEGEQYMFFCTFPG-----HSALMKGTLTLKGIGGAECDINDQMQFNTNA----------------- | |||||||||||||
5 | 2pffB | 0.05 | 0.01 | 0.21 | 0.70 | MRFsearch | --FKQGGGGGGGGGGGGQGSQEQGMGMDLYKTSKAAQDVWNR----------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 3u5ch | 0.11 | 0.06 | 0.57 | 0.41 | FFAS-3D | IVKSNTSSKKADADPSKARKNRPRPSGNEGAIRDKTRRNNRSKDVTDSATTKKSNTRRATDRHSRTGKTDTKKKVNQGWGDDKKELSAEKEAQADAAAEIAEDAAEAED---------------------------------------------------------------------------------- | |||||||||||||
7 | 5jcss | 0.04 | 0.04 | 0.95 | 1.01 | SPARKS-K | VRINEDHQKDSSNKIYNLNMIGMRIWNEEPSEEDLTHILAQKFPILTNLIPKLIDKSIYMNTKFISLNKGAHTRLDILFKNNGINKPDQLIQSSVYDSIFSEAADCFAGAIGEFKALE--------PIIQAIGESLDIASSRISLFLTQHVPTLENLDDSIKILLKEKLNIQKKSMNST-LFAFTNHSLRL | |||||||||||||
8 | 2j1dG | 0.12 | 0.03 | 0.21 | 0.28 | CNFpred | --------------------------SEAKQENENMRKKKEEEERRARMEAQLKEQRERERKMRKA----------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 6sl2A | 0.01 | 0.01 | 0.71 | 0.67 | DEthreader | LRQSRDVKLLVWILFATAYKFSDVEKGKR-GN--DL--A---M---------KGRAKEGLAFGNSLRRPVYVAPGLDKSLEGYIANISEAERALRSKLNTAMRNCLIAKEYTDVSFDLQ---GN-LDLEFRSCLSSMGL----------VTENGVSDNYVYMENDE------------------------- | |||||||||||||
10 | 4k0mC | 0.11 | 0.10 | 0.96 | 0.71 | MUSTER | -----KVYTIDEAARTAKFDETVEVHAKLG---DPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |