Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | WELDFYSRPILDENKKKVWEVLICESPLEVRDEPDSTFRYAQYCSNTQVNSVWLRQALEEAMAQSGQSPQKIRFFRTQMNNMITKACNDLGISVTPSRRTFTLNRWIEERMREVYPNHPGFQANAPNPSVQMPTQAPESLPDALVGQQWAFVTLEASAFEEMHEWEIDFREAFPLKNLGITADTKIPGLIIFSPRALPLAGWLSGLDLGSIKIDSEKDRLLLETGVSDRWILANLKERALLTEAKGFEQAKQKAQGVHFLAVQSDPQAESFAGFWLLQ |
1 | 1c0mC | 0.15 | 0.09 | 0.59 | 0.77 | DisCoVER | | WQTDFTLEPRMA---PRSWLAVTVDTAS--------SAIVVTQHGR--VTSVAVQHHWATAIAVL-GRPKAIKTDN--G-SCFTSTREWLGIAHTTGPG-AMVERANRLLKDRIRVLAKRIQLLAM--HWRPTVLEGPPV--------KIR----------------------------------ITGEWEK---------------GWNVLVW-GRGYAAVKNRDTDKVIWVPSR----------------------KVKPD-------------I- |
2 | 1u6zB | 0.07 | 0.05 | 0.64 | 0.67 | DEthreader | | AAVDLGS-----------NSFHMVIARVVDGAMQIIGRLKQRVHDGSEAM-TRGLNCLSLFAERLQGFSPCIVGTRQLATDFLKRAEKVIPYPIEIIEARFGVVIDIGAGTIKAALSRKVFGLILGV--------------GYEMEGRF-------------------------------------------RHQD-VR-------------RT--ASSLA--------QYHISQARRVAMLHEVGLNIHSAYIQNSDLPGFN-----QQLMMAT--- |
3 | 1c0mC | 0.12 | 0.09 | 0.75 | 0.87 | CEthreader | | WQTDFTLEPRM---APRSWLAVTVDTAS----------SAIVVTQHGRVTSVAVQHHWATAIAVLGRPKAIKTDNGSCFTKSTREWLARWGIAHTTGIPGNSQGQAMVERANRLLKDRIRV--------LAEGDGFMKRIPTSK------QGELLAKAMYALNHKERGENTKTPIQKHWRPTVLTEGPPVKIRIET-------GEWEKGWNVLVWGRGYAAVKNRDTDKVIWVPSRKVKPDIT----------------------------------- |
4 | 4uw8A | 0.04 | 0.03 | 0.80 | 0.57 | EigenThreader | | NQLGYGSRPWLTYTEHSNAALHFLGAGDTS--ATNHGGWIRLLVTPKGKTISDRVPAFRLS-----DNGDLWLVPDRSIETLNAAVPRFNARGLKIVAPQ---------------APEIDLIAPRGSGASAPAIRAMWCRYIGATQPGSTFYIGAS-----------------GHDGEKFDSMRGSVAIKSAWGPT--------STPTQVVLETCISRLPRWGVDHNGTLMPMADNRY--------NPETEAAKAIAKVSEYGPANEDGTENPIYKTI |
5 | 1c0mC | 0.15 | 0.10 | 0.67 | 0.53 | HHpred | | WQTDFTLEPRM--AP-RSWLAVTVDTA--------SSAIVVTQHG--RVTSVAVQHHWATAIAVLG-RPKAIKTDNGSCFTSTREWLARWGIAHTTGIPNRLLKDRIRVLAEG--------------------DGFMKRIPTSKQGE-------LLAKAMALNHKERGENTKTPIQKWPTVLTEG-P--PVK-IRI-ETGEWEKG---WNVLV-WGRGYAAVKNRDKVIWVPSRKV------------------------------------------ |
6 | 3uemA | 0.15 | 0.08 | 0.54 | 0.53 | MRFsearch | | -------------------------------------------------TTLPDGAAAESLVESS--EVAVIGFFKDVSAKQFLQAAEAI--------------------------------------------------------DDIPFGITSNSDVFSKYQ-------------------LDKDGVVLFKKTKENLLDFIKHQLPLVIEFTEQTAPKIFGG-EIKTHILLFLSVSDYDGKLSNFKTAAESFKKILFIFIDSDHTKEECPAVRLIT |
7 | 5xf7A | 0.12 | 0.10 | 0.83 | 0.51 | FFAS-3D | | ------TKPVHILEERSLLVLTPATQMLN-----QTRFLMVLFHNPSSKQSRNLAEELGKAVEIMGKGKNGIGFGK-VDITIEKELQQEFGITKAPEVESAALVVWLRRQIS--------------QKAFLFNS--SEQVAEFVISRPLVIVGFFAELFYDVIKDFPELTFVITIGNVIGRFHVTLDSVLVFKKGKQELNRVIKQHLTDFVIEELHIMSHML--------LFVSKSSESYGIIIQHYKLASKEFQNILFILVDADEPR---------- |
8 | 3hbjA | 0.12 | 0.11 | 0.91 | 0.62 | SPARKS-K | | HAAPLLSLVKKIATEAPKVTFSFFCTTFSRSNEFLPNIKYYNVHDGLPAMQENFKHVIDEAVAETGKNITCLVTDA--FFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGVHDVKSIDVLPGFPELKASDLPEGIKDIDVPFATMLHKMGLELPRANAVAINSFA----TIHPLIKFKLLLNVGPFNLTCLEWLDQH---------ENSSVVYISFGSV----VTPPPHELTALAESLEE-----CGFPFIWSFRGDPKEKLPKGFLER |
9 | 3votA | 0.10 | 0.09 | 0.83 | 0.72 | CNFpred | | -----------------GLKVTFFYNSAEDFPGNLPAVERCVPLPLF-EDEEAAMDVVRQTFVEF--PFDGVMTLFEPALPFTAKAAEALNLPGLPFTTMENCRNKNKTRSILQQ-------NGLNTPVFHEF-HTLADLENRKLSYPLVVKPVN-KELEEAVRK---VEAVNQRDLNRFV---GKTGIVAEQ--------FIDGPEFAIETLSINVHVLSIGYKGGVYIAPAQLKEETRLAIVKEVTGAVSALQGPAHTELRLDK----DGTPYVIE |
10 | 1u6zB | 0.08 | 0.05 | 0.68 | 0.67 | DEthreader | | AAVDLGS-----------NSFHMVIARV--GAM-QIIGRLKQRVHDGEEAMTRGLNCLSLFAERLQGFSPCIVGTLRQAATDFLKRAEKVIPPIEIISEERLIFGVDGASGIKAAHELRKFVLAILVF-A-------------------QAVLDTMQMYEQWREQQ---PK-LAH-PQLEA---LRWAAM-------------------LHEVGLNINHSILQNNQEQLATVR------------------------PLIQRLSKEQEYWEWR----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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