Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | EGRLLCHAMKDHIVRVANEAEFILNRQRAEDVHKHAEFESSCAQYAADRKEEEKMCDHLISAAKHRDHVTANQLKQKIVNILTNKHGAWGIPCQSQLHDFWRLDYWEDDLRRRRRFVRNPFGSTHLDIACKSSQEYALKEEKVVKSKLVFRSPTLASQNPETELVLDG |
1 | 3gfiA | 0.11 | 0.05 | 0.42 | 0.57 | DisCoVER | | ------------------------------------------------------------------TSDGP--K---TMAYLANRYFVTQITSVDKLEGLVVRVRDREDRRKILIEITEKGLETFNKGI--TGDLSEDEVILV------------------------- |
2 | 4i5sA | 0.05 | 0.04 | 0.77 | 0.83 | DEthreader | | NDSDLSELV-NNVNDLSEVFRLTHENLAQEKNRLTSILSY-MTDGM-LHD-ATEQEKEERERRLFVSNVSHELRTPLTFDQIQSQQST-EIIRDIILNNAK----------------GLGIDIYRGLGLAIAKE-IVKHGF-IW--A---NSEEGEG----------- |
3 | 6u7hA2 | 0.09 | 0.09 | 1.00 | 0.57 | CEthreader | | QALQTVATALNKIQDVVNQQGNSLNHLTSQIQAIYDRLDPPQADQQVDRLITGRLAALNVFVSHTLTKYTEVRASRQLAQQKVNECVKSQSKRYGFCGNGTHIFSIVNAAPEGLVFLHTVLLPTQYKDVEAWSGLCVDGTNGYVLRQPNLALYKEGNYYRITSRIMFE |
4 | 4akvA | 0.03 | 0.03 | 1.00 | 0.58 | EigenThreader | | YKHFDWLYNRLLHKFRKRRLILWMDHMTSGFQHFLSQWKMGKRRAEKASFLLTQDVEDRVDTFKAFSKKMDDSVLQLSTVASELVRKHVGGFRKEFQKLGSAFQAISHSFQNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFPDIIHLQKGAFAKV |
5 | 6gmhQ | 0.17 | 0.08 | 0.48 | 0.31 | HHpred | | ----LAHRYFSYLSKAATQAQYHVARARKQDEEERRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLEQRAQYVEKTKNILMFT----------------------------------------------------------------------------------- |
6 | 6gmhQ | 0.08 | 0.05 | 0.57 | 0.40 | MRFsearch | | --VKELELAHRYFSYLSKLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREK---------------------------------------------------------EEQKKLLEQRAQYVEKT-------------- |
7 | 5a63C | 0.14 | 0.13 | 0.96 | 0.68 | FFAS-3D | | ---FVAFGPPLRVIILVAGAFFWLVSLLLASVVARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLIISGVFSVINILADALGPGVVGIHGDSPYYWGVVFFDACERRRYWAL-GLVVGSHLLTSGLTFLNPWYEASAVTVSMGLWAFITAGGSLRSIQRSL-- |
8 | 6w2vA | 0.11 | 0.10 | 0.86 | 0.76 | SPARKS-K | | SKLRDPQAVLEALQAVAELARELAEKTGDPIAKECAEAVSAAAEAVKKAADLLKRHPEAAQAALELAKAAAEAVLIACLLALDYP-----------------------KSDIAKKCIKAASAEEASKAAEEAQRHPRDEIKEASQKAEEVKERCERAQEHPNAGWLEH |
9 | 5wbuA | 0.04 | 0.02 | 0.48 | 0.47 | CNFpred | | --PLVGRLIHQLLTDIGRPQALIYPLTVASKSTARHNAANKILKNMCEHSNTVQQAMMVSEELIRVAILWHEMWHEGLEEASR------------------------------------------------------------------------------------- |
10 | 6rw9A | 0.07 | 0.05 | 0.71 | 1.00 | DEthreader | | GGIPKAIGAGMSLAASATKITADNISQSEAWRRRRQEWEIQKNNAESEIRQIDAQLEALAVRRTATEMQREHMEIQQAQTQA-QLEFLQRKNKAYSRLAYFYTARCMMEKRIKSGAWGLMA----------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|