>PF06454 (272 residues) VSDWWDEINESTQWQDGIFYALCAAYALVSSVALIQLIRIELRVPEYGWTTQKVFHLMNF IVNGVRAIVFGFHKQVFVLHPKVLTLVLLDLPGLLFFSTYTLLVLFWAEIYHQARSLPTD KLRIFYMSINGVIYFIQVCIWVYLWIDDNSVVEFIGKIFIAVVSFIAALGFLLYGGRLFF MLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVVLSAFDSDASLDVLDHPVLNLIY YMVVEILPSALVLYILRKLPPKRISAQYHPIR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | VSDWWDEINESTQWQDGIFYALCAAYALVSSVALIQLIRIELRVPEYGWTTQKVFHLMNFIVNGVRAIVFGFHKQVFVLHPKVLTLVLLDLPGLLFFSTYTLLVLFWAEIYHQARSLPTDKLRIFYMSINGVIYFIQVCIWVYLWIDDNSVVEFIGKIFIAVVSFIAALGFLLYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVVLSAFDSDASLDVLDHPVLNLIYYMVVEILPSALVLYILRKLPPKRISAQYHPIR | |||||||||||||||||||
1 | 5ztyA | 0.11 | 0.11 | 0.94 | 1.17 | DEthreader | APPMKDYMILSGPQKTAVAVLCTLLGLLSALENVAVLYLILS--SHQLRYLIGSLALADFLASVVFACSFVNFHVFHGVDSKAVFLLKIGSVTMTFTASVGSLLLAAIDRYLCLPSYLLTRALVLLGIMWVLSALVSYLPLMGWTCCPRPCIPNDYLLSWLLFIAFLFSGIIYTYGHVLWKAHQHVARMRLDVELAKTLGLVLAVLLICWFPVLALMAHSLATT--LSD-QVK-KAFAFCSML-CLINSMVNPVIYALSEEIRS-------- | |||||||||||||
2 | 5ztyA | 0.11 | 0.10 | 0.92 | 1.17 | DEthreader | -------MILSGPQKTAVAVLCTLLGLLSALENVAVLYLILS-SHQLKYLFIGSLALADFLASVVFACSFVNFHVFHGVDSKAVFLLKIGSVTMTFTASVGSLLLAAIDRYLCLPPYALLTRAVLLGIMWVLSALVSYLPLMGWTCCPRPCIPNDYLLSWLLFIAFLFSGIIYTYGHVLWKAHQHVARMRLDVELAKTLGLVLAVLLICWFPVLALMAHSLATT-L-SDQV-K-KAFAFCSML-CLINSMVNPVIYALSEEIRS-------- | |||||||||||||
3 | 4xt1A | 0.09 | 0.09 | 0.99 | 1.10 | SPARKS-K | DYDEDATPCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITW-RRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRPVKQACLFSIFWWIFAVIIAIPHFMVVLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAV--SQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLLLKWISSSCEFERSLKRALILTESLACCLNPLLYVFVGTKFRQELHCLLA | |||||||||||||
4 | 3dqbA | 0.12 | 0.11 | 0.90 | 1.21 | FFAS-3D | ----------AEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLR-TPLNYILLNLAVADLFMVFGGFTTTLYTSLHPTGCNLEGFFATLGGEIALWSLVVLAYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWTNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLIYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNP---VIYIFRN-------------- | |||||||||||||
5 | 5wb1A | 0.09 | 0.09 | 0.94 | 1.17 | DEthreader | ----CV-FTDVLNQSKPVTLFLYGVVFFGSIGNFLVIFTITWRRRIQCDVYFINLAAADLLFVCTLPLWMQYLLD-HNSLASVPCTLLTACFYVAMFASLCFITEIALDRYYAIMRYRPQA-FSFWWIFAVIIAIPHFMVVT-KKDCDYDYLEVYPIILNVELMLGAFVIPLSVIYCYYRISRIVSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLL----C--ERSLKRALILTESLAFC-HCCLNPLLYFVGKFYATFNETIVEE | |||||||||||||
6 | 5ztyA1 | 0.11 | 0.11 | 0.94 | 1.17 | DEthreader | APPMKDYMILSGPQKTAVAVLCTLLGLLSALENVAVLYLILS--SHQLRYLIGSLALADFLASVVFACSFVNFHVFHGVDSKAVFLLKIGSVTMTFTASVGSLLLAAIDRYLCLPSYLLTRALVLLGIMWVLSALVSYLPLMGWTCCPRPCIPNDYLLSWLLFIAFLFSGIIYTYGHVLWKAHQHVARMRLDVELAKTLGLVLAVLLICWFPVLALMAHSLATT--LSD-QVK-KAFAFCSML-CLINSMVNPVIYALSEEIRS-------- | |||||||||||||
7 | 5ztyA1 | 0.11 | 0.10 | 0.92 | 1.17 | DEthreader | -------MILSGPQKTAVAVLCTLLGLLSALENVAVLYLILS-SHQLKYLFIGSLALADFLASVVFACSFVNFHVFHGVDSKAVFLLKIGSVTMTFTASVGSLLLAAIDRYLCLPPYALLTRAVLLGIMWVLSALVSYLPLMGWTCCPRPCIPNDYLLSWLLFIAFLFSGIIYTYGHVLWKAHQHVARMRLDVELAKTLGLVLAVLLICWFPVLALMAHSLATT-L-SDQV-K-KAFAFCSML-CLINSMVNPVIYALSEEIRS-------- | |||||||||||||
8 | 5wb1A1 | 0.07 | 0.07 | 0.97 | 1.08 | SPARKS-K | -------PCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRQCSGDVYFINLAAADLLFVCTLPLWMQYLLDHNSLASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYRPVKQACLFSIFWWIFAVIIAIPHFMVLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAV--SQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLLKWISSSCRSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE | |||||||||||||
9 | 3capA | 0.10 | 0.09 | 0.90 | 1.18 | FFAS-3D | ----------AEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHFGPTGCNLEGFFATLGGEIALWSLVVLYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLIYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNP---VIYIFRN-------------- | |||||||||||||
10 | 5b2nA | 0.09 | 0.08 | 0.88 | 1.17 | DEthreader | ----E--FDYSAGQFEFIDHLLTMGVGVHFAALIFFLVVS-QFVAPKYRIATALSCIVMVSAGLILNSQAVMWTDAYLQDL-TFSNGYRYVN-WM--ATIPCLLLQLLIVLNLK-GKELFSTATWLILAAWGMIITGYVGQ-LY---EVDD-IAQLMIWGAVSTAFFVVMNWIVGTKIFKNRATM-LGG--TDSTITKVFWLMMFAWTLYPIAY-LVPAFMN-------NADGVVLRQLLFTIADISSKVIYGLMITYAIQQS--AA-YA-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |