>PF06437 (414 residues) MTTRYRVEYALKTHRRDQFIEWIKGLLAVPFVLHSQPTGVFESRNGTIGEMAEIAHRRYA EIMQDVEDMIDDHIAHQKVGLGGQSKLKLLVPSIGTFFTRLPLADAFRYQDKKRFISSRR FVPPSFNDIRVILNTAQLMGVTSAGSVDLATFDGDVTLYDDGKSLEPTNPVIERIINLMS HNTKIGIVTAAGYTEADKYYGRLHGLLEAIKASKILTPEQKKNLLVMGGESNFLFTYDAN SPHLLTHYQRRSWILPSMSTWTQPSITALLDLAESSLRECVTNLALPATILRKERAVGII PREPGFKFARESLEETVLVVQKKLEMSEVGRALPFCAFNGGNDVFVDIGDKSWGVLVCQK FFGGNVEDENQWIKRERTLHVGDQFLSAGSNDFKARVVGTTAWIASPTETVELL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MTTRYRVEYALKTHRRDQFIEWIKGLLAVPFVLHSQPTGVFESRNGTIGEMAEIAHRRYAEIMQDVEDMIDDHIAHQKVGLGGQSKLKLLVPSIGTFFTRLPLADAFRYQDKKRFISSRRFVPPSFNDIRVILNTAQLMGVTSAGSVDLATFDGDVTLYDDGKSLEPTNPVIERIINLMSHNTKIGIVTAAGYTEADKYYGRLHGLLEAIKASKILTPEQKKNLLVMGGESNFLFTYDANSPHLLTHYQRRSWILPSMSTWTQPSITALLDLAESSLRECVTNLALPATILRKERAVGIIPREPGFKFARESLEETVLVVQKKLEMSEVGRALPFCAFNGGNDVFVDIGDKSWGVLVCQKFFGGNVEDENQWIKRERTLHVGDQFLSAGSNDFKARVVGTTAWIASPTETVELL | |||||||||||||||||||
1 | 6rmeA | 0.33 | 0.29 | 0.87 | 1.17 | DEthreader | --------YNQ-LKNKDSLIMFLVEIFRSLFVSNCI------------------DKNI-DNVLLSIEEMFIDHYYNPQ-----HSRLKYLIDDVGIFFTKLPITKAFHTYNKKYRITKRLYAPPTFNEVRHILNLAQILSL-E-EGLDLLTFDANETLYPDHDFNDE-V-LASYISCLLKK-MNIAIVTAASYNDAEKYQKRLENLLKYFSK-HNIKDGSYKNFYVMGGESNYLFKCNE-EA-TLYSVP-ENEWRHYKKFVDYDTVQEILNISEKCLEKVIKDFGLCAQIQRKEKSIGLVP-NKNYMIKYEVLEEAVIRIKKEIIKN-KI-TAPYCAFNGGQDLWVDVGNKAEGLLILQKL-L--------KIQKKKCCHIGDQF-LHSGNDFPTRFCSLTLWVSNPQETKACS | |||||||||||||
2 | 6rmeA | 0.30 | 0.23 | 0.78 | 1.00 | DEthreader | --------------SLIMFLVEIFRSLFVSNCID--------------------K--NIDNVLLSIEEMFIDHYYNPQ-H----SRLKYLIDDVGIFFTKLPITKAFHTYNKKYRITK-RLYAPPTNEVRHILNLAQILSL-E-EGLDLLTFDANETLYPDGHDFNDEVL-ASYISCLLK-KMNIAIVTAASYNDAEKYQKRLENLLKYFSK-HNIKDGSYKNFYVMGGESNYLFKCN--EEATLYSVP-ENEWRHYKKFV---DYDTVQEILN-SE-------------QR-KEKSIGLVPNKNYM-------A--RI-KE-IIK---NKITAPYCAFNGQDLWVDVGNKAEGLLILQKLLK---------IQKKKCCHIG-DQFLHSGNDFPTRFCSLTLWVSNPQETKACL | |||||||||||||
3 | 6rmeA | 0.35 | 0.31 | 0.88 | 15.35 | HHpred | WNSRYS-YNQLK--NKDSLIMFLVEIFRSLFV--SNCI-----------------DKNIDNVLLSIEEMFIDHYYN-----PQHSRLKYLIDDVGIFFTKLPITKAFHTYNKKYRITKRLYAPPTFNEVRHILNLAQILSLE--EGLDLLTFDANETLYPDGHDFNDEASYISCLLKKMNI----AIVTAASYNNAEKYQKRLENLLKYFSK-HNIKDGSYKNFYVMGGESNYLFKCNEEA--TLYSVPENEWRHYK-KFVDYDTVQEILNISEKCLEKVIKDFGLCAQIQRKEKSIGLVPN-KNYMIKYEVLEEAVIRIKKEIIKN--KITAPYCAFNGGQDLWVDVGNKAEGLLILQKLLK---------IQKKKCCHIGDQFLH-SGNDFPTRFCSLTLWVSNPQETKACL | |||||||||||||
4 | 4bndA | 0.13 | 0.07 | 0.55 | 0.55 | DisCoVER | ------------------------------------------------------------------------------------------------------------------------------------------------KMKKILSFDIDNTLNEPKMPI--FPEMAELLATLSQK-YIIAPISGQKYDQ---FLIQIINN--LPESANLD----------------NFHLFVA-QGTQYYAHKAGEWKQVFNYALTDEQANAIMGALEKAAKEL-GHWVLLDEINENRESMIAYSAIGQKADPMTKRNEIAKLASQYA------PEF-EFEVAGTTTINGFVQNKEFGMNHLMEEL--------NVT-KEEILYFGDMTQPGGNDY-PVVQMIETITVRDWKETALK- | |||||||||||||
5 | 6rmeA | 0.34 | 0.30 | 0.87 | 1.15 | MRFsearch | ---SRYSYNQLK--NKDSLIMFLVEIFRSLFVSN-------------------CIDKNIDNVLLSIEEMFIDHYYNPQ-----HSRLKYLIDDVGIFFTKLPITKAFHTYNKKYRITKRLYAPPTFNEVRHILNLAQILSLEE--GLDLLTFDANETLYPDGHDFNDEVSYISCLLKKMN----IAIVTAASYNNDEKYQKRLENLLKYFSK-HNIKDGSYKNFYVMGGESNYLFKCNE--EATLYSVPENEWRHYKKF-VDYDTVQEILNISEKCLEKVIKDFGLCAQIQRKEKSIGLVPNKN-YMIKYEVLEEAVIRIKKEIIKNKIT--APYCAFNGGQDLWVDVGNKAEGLLILQKLLK---------IQKKKCCHIGDQFL-HSGNDFPTRFCSLTLWVSNPQETKACL | |||||||||||||
6 | 6rmeA | 0.34 | 0.30 | 0.88 | 2.27 | SPARKS-K | -WNSRYSYNQLKN--KDSLIMFLVEIFRSLFVS-----NCIDKN--------------IDNVLLSIEEMFIDHYYN-----PQHSRLKYLIDDVGIFFTKLPITKAFHTYNKKYRITKRLYAPPTFNEVRHILNLAQILSL--EEGLDLLTFDANETLYPDGHDFND-EVLASYISCLLKK-MNIAIVTAASYNDAEKYQKRLENLLKYFSKHN-IKDGSYKNFYVMGGESNYLFKCNEEAT--LYSVPENEWRHYKK-FVDYDTVQEILNISEKCLEKVIKDFGLCAQIQRKEKSIGLVP-NKNYMIKYEVLEEAVIRIKKEIIKNKIT--APYCAFNGGQDLWVDVGNKAEGLLILQKLLK---------IQKKKCCHIGDQFL-HSGNDFPTRFCSLTLWVSNPQETKACL | |||||||||||||
7 | 6rmeA | 0.33 | 0.28 | 0.86 | 1.16 | MAPalign | ----------------------------------RYSYNQLKNKDSLIMFLVEIFRSLFDNVLLSIEEMFIDHYYNP-----QHSRLKYLIDDVGIFFTKLPITKAFHTYNKKYRITKRLYAPPTFNEVRHILNLAQILSL--EEGLDLLTFDANETLYPDGHDFNDE-VLASYISCLLK-KMNIAIVTAASYNDAEKYQKRLENLLKYFSKH-NIKDGSYKNFYVMGGESNYLFKCNE--EATLYSV-PENEWRHYKKFVDYDTVQEILNISEKCLEKVIKDFGLCAQIQRK-EKSIGLVPNKNYMIKYEVLEEAVIRIKKEIIKNKI--TAPYCAFNGGQDLWVDVGNKAEGLLILQKLL---------KIQKKKCCHIGDQF-LHSGNDFPTRFCSLTLWVSNPQETKACL | |||||||||||||
8 | 6rmeA | 0.32 | 0.29 | 0.88 | 0.98 | CEthreader | ----------------------WNSRYSYNQLKNKDSLIMFLVEIFRSLFVSNCIDKNIDNVLLSIEEMFIDHYYN-----PQHSRLKYLIDDVGIFFTKLPITKAFHTYNKKYRITKRLYAPPTFNEVRHILNLAQILSLE--EGLDLLTFDANETLYPDGHDFND--EVLASYISCLLKKMNIAIVTAASYNNAEKYQKRLENLLKYFSK-HNIKDGSYKNFYVMGGESNYLFKCN--EEATLYSVPENEWRHY-KKFVDYDTVQEILNISEKCLEKVIKDFGLCAQIQRKEKSIGLVPNKN-YMIKYEVLEEAVIRIKKEIIKNKI--TAPYCAFNGGQDLWVDVGNKAEGLLILQKLLK---------IQKKKCCHIGDQ-FLHSGNDFPTRFCSLTLWVSNPQETKACL | |||||||||||||
9 | 6i5xA | 0.13 | 0.07 | 0.58 | 0.56 | MUSTER | -----------------------------------------------------------------------------------------------------------------------------------------SALQDRPIKNTICLFDVDETLTPARRAVTP--EMLMLLSQLRHK-CAIGYVGGSNLAKQQEQLG-----------TGATDVTSLFDFCFPGLM--------------AFRLGKPLASTSFIEWIGEEKYQKLVNFILRYFADLQLPKKRGTFIEFRNGMINVSPIGRNASEAYDKEHHIRTDMVNALKKEF--PDYGLTYSIGGQI-SFDVFDKTYCLRHVEAEK------EISGVEYTTIHFFGDKCFP-GGNDYEIYSDTIGHSVHGPEDTMKQL | |||||||||||||
10 | 6rmeA | 0.34 | 0.30 | 0.88 | 4.61 | HHsearch | -WNSRYSYNQLK--NKDSLIMFLVEIFRSLFV--SNCI-----------------DKNIDNVLLSIEEMFIDHYYN-----PQHSRLKYLIDDVGIFFTKLPITKAFHTYNKKYRITKRLYAPPTFNEVRHILNLAQILSLE--EGLDLLTFDANETLYPDGHDFNDEASYISCLLKKMNI----AIVTAASYNNAEKYQKRLENLLKYFSK-HNIKDGSYKNFYVMGGESNYLFKCNEEA--TLYSVPENEWRHYK-KFVDYDTVQEILNISEKCLEKVIKDFGLCAQIQRKEKSIGLVPNK-NYMIKYEVLEEAVIRIKKEIIKN--KITAPYCAFNGGQDLWVDVGNKAEGLLILQKLLK---------IQKKKCCHIGDQFLH-SGNDFPTRFCSLTLWVSNPQETKACL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |