>PF06387 (181 residues) MVKLGSNLAEKPEKEQALEDGFDNIPLITPLDVSQLQQPFPDKVIVKTTTEYQLQQKKKR KLYVPGIKKLNINLYDEVSEKVKLTGLILITMAFLACLLLLVMYKALWYDQLSCPEGFVF KHKHCTPAALEMYYSEQEPGARGGLYTAISHLTQAKKTIPELPSPWLPVINALKEAEKAK E |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MVKLGSNLAEKPEKEQALEDGFDNIPLITPLDVSQLQQPFPDKVIVKTTTEYQLQQKKKRKLYVPGIKKLNINLYDEVSEKVKLTGLILITMAFLACLLLLVMYKALWYDQLSCPEGFVFKHKHCTPAALEMYYSEQEPGARGGLYTAISHLTQAKKTIPELPSPWLPVINALKEAEKAKE | |||||||||||||||||||
1 | 6k7gA2 | 0.05 | 0.04 | 0.71 | 0.57 | DisCoVER | KLSNQAYINWDLDMHYTAAMARTSNLNELGVKYIFSLMKADIKIWILTGDKQAIMGMIVIDFALIIDGTLALCK------------AV-ICC-RVKVV--TLAIGDGANDVIQAHVGVGISGLQAASSDY-SI------------------------AQFKYLKNLLMIH----------- | |||||||||||||
2 | 6z16A | 0.05 | 0.04 | 0.83 | 0.83 | DEthreader | --LIMLVVYWTSIMLITKSWLALHSA----VKAGIYVIARLTWVAGLLCW-SF--------------TSLGIGGL-SFHYDG-ENVFMVAVLAAIFHLFNHATFKG-SLMTIAGSLMAGLPP-FNG-FLSKEMFFT-----GFVPNVLSDSVLAVEALDHHTPELMTGVLLFGLVLYRTFP | |||||||||||||
3 | 1vt4I3 | 0.04 | 0.04 | 1.00 | 0.56 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 3uq3A | 0.08 | 0.08 | 1.00 | 0.58 | EigenThreader | EKAEGNKFYKARQFDEAIEHYNKAWELHKDIRAAAEYEKGEYETAISTLNDAVEQGREMRADVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHEARLEGKEYFTKPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALET | |||||||||||||
5 | 2pffB | 0.19 | 0.14 | 0.77 | 0.45 | HHpred | LRKAKAPSGLDQSRIPFSERKFSNLPVASPF-HSHLLVPASDKDLVKNNVSFNAKDI-----QIPVYDTFDGSLSGSISERI------------VDCI---IRLPVKWETT----TQFKATHILDF-----------GP-GGASGLGVLTHRNKDG-TGVRIVAGTLDINPDDDYGFK--- | |||||||||||||
6 | 4jkvA2 | 0.18 | 0.08 | 0.43 | 0.57 | MRFsearch | ---------------------------------------------------------------------------EKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFF----------------------------NQAEWERSFRDYVLCQANCEIKNRPSLLVEKINLFAMFGT- | |||||||||||||
7 | 6w17E | 0.18 | 0.15 | 0.86 | 0.38 | FFAS-3D | MPAYHSSFLSLTDVPTTG--NIAMLPLKTKFRGPAYPADESQMDIIDECIGLFRANCFFRNFEIKGPAD---------------RTLIYGTLFISECLGRVRQLNSLALENFSIPAGFPLNALYAPPLSMRTYLTQ------FRQELAYRLLSHVYATEKDHPSKWWTCFSKRRFMNKA-- | |||||||||||||
8 | 5aftV | 0.09 | 0.08 | 0.89 | 0.77 | SPARKS-K | GNKVSRQSVLCGSQNIVLNGKTIIMNDCI-IRGDLANVRVGRHCVVKSRSVIRPPFSKGVAFFPLHIGDHVFIEEDCVVNAAQIGSYVHVGKN------CVIGRRCVLKDCCKILDNTVLPPETVVPP--FTVFSGCPGLFSGE---------LPECTQELMIDVTKSYYQKFLPLTQV-- | |||||||||||||
9 | 5ujaA | 0.19 | 0.10 | 0.52 | 0.63 | CNFpred | ----------------------------------------------------------------------------KVDENQKAYYPSIVANRWLAVRLECVGNCIVLFASLF---AVISRHLSAGLVGLSVSYSLQVTTYLNWLVRMSSEMETN--------IVAVERLKEYSETEKEAP | |||||||||||||
10 | 5mqfM | 0.10 | 0.08 | 0.82 | 0.83 | DEthreader | -------LRALP-------------------------TAVRGYIAHLCDLISQNPDKVQSLVYRSGHFSYAARLALLNSLRHVALHAVTGKPHTWVLATLAWCATALPARRA-WLAKYDRILDLRIATQINYAMFLEEHKYFESAYIWSTTFTLYAQVDMIYIYMCLRFMECAWFERHNIK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |