Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | ILNMSDNIDCEEFRLERGPQLLALVEDAFSRQADGPQDRWLISLSKPNENDKHLLMTLAGEQGVIPTKDVLMALGDVKRSLAEIGIQNYSTTTSCQSHPNQTRSDYGKLFVVLVIIGSICAIIIVLGLIYNCWQRRLPKMKNMSHGEELRFVENGCHDNPTLDVASDSQSEMQEKKPSVNGGNNINGPDSWDVLINKQASEDVDVFEEDTHL |
1 | 2pffA1 | 0.07 | 0.06 | 0.94 | 0.68 | DisCoVER | | GGGGGGGGGGGGGGGGGG-GGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GVTLQGGAKVYQIYAKYGAKGSTLIVVPFN--KNGGLGWDL--DA--IIPFAMGCVKKQKSETRPAQVILPMSPNLEWANQLTVC--GAIIGWTRGTMSANNIIAFSQKNLLGLLTPEVVPVMADLNG- |
2 | 4zadA | 0.07 | 0.06 | 0.87 | 0.83 | DEthreader | | ----LFRILGCPGGRARIALHLEIIDFLVANRNPK-----NWSIARGMVITGLFISSMPIPDGA-TEAEYIGGLCQAVP--P-DCEMVFE-YLPLYVHISYRAIMPISNPGDETHTLIGGLVSAETKYLISQHPVLSK-IV-EDVF----TP--A--QALWLAVKINLTNELSNLVGDFLFR----SKECYVSILHPFALLIRQGGKCVTTC |
3 | 1vokA | 0.10 | 0.08 | 0.75 | 0.52 | CEthreader | | TVNLDCKLDLKAIALQARNAEYN-PKRFAAVIMRIREPKTTALIFA----SGKMVCTGAKS-----EDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVG---------------------------------------SCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGK---IVITGAKMRDETYKAFENIYP |
4 | 2douA | 0.07 | 0.06 | 0.89 | 0.60 | EigenThreader | | NDPTTYGYCFLEEAARWYEGRYGEGLAHLLLALTGAKERVVELFSLSLAGFRLGFALGS-------EEALARLERVKGVIDF---NQYAGVL---------RMGVEALKTPKEVVRGYARVYRERALGMAEALKGVLSLLPPRATMYLWGRLPEGVDDLEFGLRL-----VERGVALAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREA |
5 | 6kspA | 0.15 | 0.08 | 0.57 | 0.37 | HHpred | | ----RDSAVYEYFRAKGFAELWRTISKNGAFLWDVTDDDCSVTVIGNSISSKGYGIALQ--HGSPYRDLFSQRILELQDTLDVLKQKWWPHTGRCDL-------SFAGVFC-ILAIGLLLACLVAAL--ELWWNSN---------------------------------------------------------------------------- |
6 | 6oceA | 0.13 | 0.06 | 0.47 | 0.43 | MRFsearch | | ------EVDAIEYYKAEIEKIGKEEADERQKIMKSAVPAAFVSFRSRWSNPTVWITEWAP-----EPRDVY--------------WNNLSI--------PFVSLTVRRLIVAVAFFFLNFFYVIPIAFVQSLA------------------------------------------------------------------------------- |
7 | 3qaeA1 | 0.13 | 0.05 | 0.39 | 0.46 | FFAS-3D | | --QVANPKLAQEKIASKKAELLELANQAYPSIVKRGGGARDLHVEQIKGEPDFLVVYIHVDTQEAMGANMLNTLEALKPVLEEL-------------------------------------------------------------------------------------------------------------------------------- |
8 | 3h8eA1 | 0.08 | 0.07 | 0.82 | 0.68 | SPARKS-K | | ELVVKSVAKLGAVAKAVDLASEGAISAVLKRGLAGKPGQ-TLLLQNLQGLKARVLLVGSGKDEALGDRTWRKLVASVAGVLKGLNGADAVLALDDVAVNNRDAH-------------YGKYRLLAETLLDGEYVFDRFKSEPRALKK-------------VTLLADKAGQAEVERAVKHASAIATGMAFTRDLGNLPPNLC----------- |
9 | 2gifA | 0.14 | 0.07 | 0.47 | 0.56 | CNFpred | | -------------------VLLRDVAKIELGGE----YDIIAEFN----GQPASGLGIKL----ATGANALDTAAAIRAELAKMEPFF----SGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQ------------------------------------------------------------------------------ |
10 | 6mzbB | 0.09 | 0.07 | 0.76 | 0.83 | DEthreader | | ---MQENVNM--ER--VVFKILRLCRCSLF--------ATRLF--------------PSEIVFPVGAKTPIVIMEVFLKYLNF-GTLNKIHL-FDEQDEVLMESLTQFLGWVLNTDTYDKMNKLENRKDIAQDMVLYHVRCDRQLLLVKCGIQMYYELG-----------QELVRLFVSKYNWHGFNVAGLCGLLELNIYQNL--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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