Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MKWLTSFGRAVISCYKSLLLTQLRVLDRLILDHGLLRVLTCSRRVLLVQLDLVYRLAYTPTQSL |
1 | 6xz4A2 | 0.08 | 0.08 | 1.00 | 1.33 | DEthreader | | LREAGDSLVELGDLVVSLTECSAHAAYLAAVATEGKAVQTAILGGAMSVVSACVLLTQCLDLAK |
2 | 3dyjA1 | 0.06 | 0.06 | 0.97 | 1.33 | DEthreader | | QEKLAQAAQSSVATITRLADVVKLGAASLGA--EDPETQVVLINAVKDVAKALGDLISATKAAA |
3 | 1ef4A | 0.14 | 0.09 | 0.67 | 0.58 | DisCoVER | | ---RC------LSCGK--PVSAYFNEYQRRVADGE--DPKDVLDDLG--L--KRYCCRRM---- |
4 | 1rw6A1 | 0.05 | 0.05 | 0.98 | 1.17 | DEthreader | | KYLEFKAKERLEAKHRERMSQVMREWEEAERQAKKKAVIQHFQEKVESLEQEAANERQVETMA- |
5 | 2y44A | 0.03 | 0.03 | 1.00 | 0.72 | CEthreader | | SQSAVAAVVSSAREASEAKERAEKAVERAKSKKRGVDTATEAAARAAAAAQRAETVVSDARKHA |
6 | 5doqA3 | 0.08 | 0.08 | 1.00 | 0.58 | EigenThreader | | GYDPVLLSRILTELTLTVHIIYPLMIAIAQWVGHYILLARRWTRGFVTAIGLQLSLLWTAEGAT |
7 | 5cmwA | 0.19 | 0.16 | 0.81 | 0.29 | HHpred | | -KRLVDHGSEWRVVLKCLV-----VIEFLLLNVGDEQIRSCLLTHI-LTREIA-QFKVKF---- |
8 | 3thwB3 | 0.14 | 0.12 | 0.91 | 0.40 | MRFsearch | | --FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVA---- |
9 | 3dwwA | 0.09 | 0.08 | 0.91 | 0.44 | FFAS-3D | | ---VERCLRAHRNDMETIYPFLFLGF--VYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLR- |
10 | 6xt4A3 | 0.18 | 0.17 | 0.94 | 0.79 | SPARKS-K | | KKALEIILRAAEELAKLALAAAVVAATIVVLTQGSE----LAKKALEIIERAAEELKKSPDPLA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|