>PF06323 (217 residues) QYLQYVREQLMVATADLSGETKGQLLAWLENAQFDTKNYPRKKQRIWDEETESWITLNNP PIPGKQSLAKGSAIPLVKPVEYSTASWRRAVLSLDEHYKAWLLWNYSENTCWEHQVEITQ WGWSAFAAQLDGKKMAGKTQERLRALIWLAAQDVKSELAGREVYQYKELAGLVGVSEKNW SETFTRHWLTMRAIFLRLDQASLLSVSESRSEQVAFN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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Seq | QYLQYVREQLMVATADLSGETKGQLLAWLENAQFDTKNYPRKKQRIWDEETESWITLNNPPIPGKQSLAKGSAIPLVKPVEYSTASWRRAVLSLDEHYKAWLLWNYSENTCWEHQVEITQWGWSAFAAQLDGKKMAGKTQERLRALIWLAAQDVKSELAGREVYQYKELAGLVGVSEKNWSETFTRHWLTMRAIFLRLDQASLLSVSESRSEQVAFN | |||||||||||||||||||
1 | 2di3A | 0.07 | 0.06 | 0.86 | 0.65 | DisCoVER | KI--GD-HLPSERALSET---LGV--SRSSLREALRVLEALGTISTATGSGPRSGTIITAAPGQA-------LSLVTTNQVGHHDIYETRQLLE---GWAAL-HS---SAER--G--DWDVAEALLE-KMDDPSLPLEDFLRFDAEFHVVISKGA--ENPLISTLMEALRLSVADHT-VADWRATLQKEHRAILRAGSTVAATLIKEHIEGYYEET- | |||||||||||||
2 | 6n3qA | 0.06 | 0.04 | 0.73 | 0.83 | DEthreader | LGQNLLELGVSPIITSSIFQAQKCAILILGQAVVVMCLIFMFALILLELLSKGY------------------------LG-SGISLFTATNIAEQIFWRA----------------Q--MTVAIFVLYLQGFRYEIYPIK-LFYTSNTPIMLQSALTSNIF-SVFSKTWIEISGTSPKIIPTAAAFGGATIGLGASILMATTTI------------- | |||||||||||||
3 | 3sksA | 0.08 | 0.08 | 1.00 | 0.46 | CEthreader | GDADWIVNHGKTMYKELSAETDEFFNFMLDNDLLDAKKGKAGGGYCTYIENYKAPFIFSNFFQVYESRKFEIPEYNFFEEDADKYYFSHLSSALLFLPYGVSVDEYQHYVYENPEASPEERKTAWRNIEKKYLPHSPFYYIDYTLAQICALQFWKRARDNRQEA-WEDYVNLCQQGGSKSFLELVEVANLTSPFAEGCVKSVITEIEAWLHAIDDTK | |||||||||||||
4 | 6sxlA | 0.07 | 0.06 | 0.85 | 0.62 | EigenThreader | QEQKTIVETALDQSLVITEPCALEMIHTMSLIHDDLP-AMDNDDLRR-----GKPTNHKVYGAI---LAGDALLSYAFEYVARVIVRLGQAVGAGLVGGQVVDLESEGKTDVTLNFIHTHKLEVCVTAGAILAGAKQLLSRYAQNIGLAFQIVDDILDITAYPSLWAEAQKLVAEAIASLNPLKALAEYIVNR------------------------ | |||||||||||||
5 | 1t33A1 | 0.12 | 0.05 | 0.38 | 0.28 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------NIPTTTTKGEQAKSQLIAAALAQFGE--YGLHA-TTRDIAALAGQNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERL- | |||||||||||||
6 | 2qibA | 0.16 | 0.10 | 0.64 | 0.23 | MRFsearch | --LQRASDDLADRFVEPR----------------------------------------------------------QGPLGARLLRVGRYFDFVDEHGPGFSALRGGPTTTNALVDSVRQAAYVQILSHLDVTEPPARLELVVRSWISLAESTALLWLDGR-RIPRAELETQ--------------LVHDFAALAVSAAYDEEGALVRRVLAD---- | |||||||||||||
7 | 5ch6A | 0.11 | 0.11 | 0.96 | 0.70 | FFAS-3D | SDVAKLREEVPAALKGAPKPAKLVLECIGRFFLQGSKAFGKATHMV------PSRQASLLILEFFLLSDCTEMEPSVKEEADLAATWRKRLIASDIDARGLLLLVFGIPALFRNEDLRNLIRLSCPKEISRSRFLLARVPDVIQGMINVEAVDFAYTFGLEEKFPIWKILTSFEDSPIRLKKANENYLSAMKSVTRCLEDEKIIQLEKEMADLDK-- | |||||||||||||
8 | 5cwcA | 0.13 | 0.10 | 0.76 | 0.79 | SPARKS-K | SEKEELRERLVKICVENGDDTEELVREAAERAGIDS---------------------------------------------------SEVLELAIRLIKECVENAQREGYDISEACRAAAEAFKRVAEAAKRAGISSEVLELAIRLIKECVENAQREGYDISEARVAEAAKRAGISSETLKRAIEEIRKRVEEAQREISEACRQAAEEFRKKAEELK | |||||||||||||
9 | 4c9bB | 0.10 | 0.07 | 0.77 | 0.68 | CNFpred | MSWEALKKSINGLINKVNISISIIIQELLQENIVR------------------------------------------GRGLLSRSVLQAQSASPFTHVYAALVAIINSK-FPQIGELILKRLILNFRKGYRR-NDKQLCLTASKFVAHLINQNVAHEV-----LCLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINAIFERLRNILHES | |||||||||||||
10 | 3bzkA | 0.09 | 0.06 | 0.71 | 0.83 | DEthreader | ----------EELSALPS-GRVQPQQVAA-------------------------------------I--YRKEVTGLDDTQLRMLEERLRYLELERR--I----------RDIATRLEDLYLPYKQKRRTQIALLGADAILMERFAEDLLDKLRVFMK-NEAVPCEVMIAERFGLSNKWLAEVVRWTWKKLYTHLETDLFGERDGEDSLKLARSLDA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |