Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | AEAGLRICNDTAQPQMVAVGYLRDGGWVSLGWWKIEPQGCAVTVDGDLQNRYYYYRAEIDAGPFNGNPEFTFCTDPKVFEILGDDNCEARGYEAETFAEIDTGPSATDFTFRLT |
1 | 4jdeA | 0.11 | 0.09 | 0.76 | 1.00 | DEthreader | | RTAKVSIDNQTGSHFKFQVTHKYGWDADKSDVVMFQPDEVKEIFKSVAYNDNWLVDGTMVHAKFISDSRS---------------------------WKQHMLTEDKTTTIRVF |
2 | 2ahnA | 0.09 | 0.07 | 0.82 | 1.00 | DEthreader | | --ATISFKNNCPYMVWPGTLTS--DQKQLTTGFELASQASFQLD--TPVPWNGRFWARTGCCATA------DCASGQVMCNG----N-----GAIPALEFNIPQDCPNYAITFC |
3 | 2ahnA | 0.09 | 0.07 | 0.82 | 1.00 | DEthreader | | --ATISFKNNCPYMVWPGTLTS--DQKQLTTGFELASQASFQ-LDTPVPW-NGRFWARTGCCATA------DCASGQVMCNG----N-----GAIPALAEFIDNGGPNYAITFC |
4 | 2ahnA | 0.07 | 0.05 | 0.81 | 1.00 | DEthreader | | --ATISFKNNCPYMVWPGTLTS--DQKPQTTGFELASQASFQ-LDTPVP-WNGRFWARTGCATA-------DCASGQMCNG-----N----GAIPATLAEFIDNGGPNYAITFC |
5 | 3dznA | 0.15 | 0.13 | 0.85 | 0.29 | HHpred | | --ATFEIVNRCSYTVWAAASKG-DAALDAGG-RQLNSGESWTINVEPGT----------KGGKIWAR---TDCYFDGSGICKGLLRCKRFGRPPTTLAEFSLNQYGDYIDISNI |
6 | 4jdeA | 0.10 | 0.08 | 0.78 | 0.68 | DisCoVER | | RTAKVSIDNQTGSHFKFQVTHKYTWDADKSDVVMFQPDEVKEIFKSVAYNDNWLVDGTMVQEHAKFISDSRS------------------------WKQHMLTADGKTTTIRV- |
7 | 1yq2A3 | 0.12 | 0.08 | 0.68 | 0.43 | MRFsearch | | ---TLAVANLRHSDVVLRWRVEHDGAVAASGEVAARAGESATIALPPLGETWLTVEAVLRDATGWAPA-----------------------GHPLGAVQLDLS----------- |
8 | 4jdeA | 0.12 | 0.11 | 0.93 | 0.72 | SPARKS-K | | RTAKVSIDNQTGSHFKFQVTHKYTGWADKSDVVMFQPDEVKEIGFLTTGVDNWLVDGTMVIGKKSYIEHAKFISDSRSWQHMLTAEDDGKT------TTIRVFPT--EIHFISP |
9 | 3g7mA | 0.17 | 0.14 | 0.82 | 0.84 | MAPalign | | --APLTITNRCHFTVWPAVALV---LAQGGGGTELHPGASWSLDT--PVIGSQYIWGRTGCGRCQ-----TGDCGGSSLTCGG--------NPATTMAEVSVSAAGSRLQIVFC |
10 | 3g7mA | 0.15 | 0.13 | 0.90 | 0.66 | CEthreader | | --APLTITNRCHFTVWPAVALVLAQ---GGGGTELHPGASWSLDTPV--IGSQYIWGRTGCSFDRAGKGRCQTGDCG----GSSLTCGGNPAVPTTMAEVSVLQGNYTYGVTST |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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