Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | RNVYLLALLAASNALTNGVLPSVQSFSCLPYNNMTFHLSVVLGNIANPLACFLAMFVVLRSPVGLGLVSLAAAVFAAYLLALAALSPCPPLQASLTG |
1 | 3ay5A | 0.09 | 0.08 | 0.96 | 1.33 | DEthreader | | QRDNKAAALLMLTKNVD-FVKDAHEEMEVQLIIPCLALVRASKACLKKIRMLVAENGKKDQVAQLDDIVDISDEISPSVDDLALSIYMSHLTVT--- |
2 | 6v6hA | 0.05 | 0.05 | 0.97 | 1.33 | DEthreader | | AKALDMLAIGVHELGNI-SERRIERLNNPPLVGSGFMIAH-TAAALVSENKVYCH-PASMGSARKAIKVVENVERIIAIELLGACQGDLPPWEEDRV |
3 | 7cmgA | 0.03 | 0.03 | 0.90 | 1.17 | DEthreader | | LDGFDKVDKSLTSSID-GSDKRNNLVLSNYVWER-SLVLQEADSLCTFIDDLKLAIASIKPVAAITLLTKLQSDVRYAQGEVLADLVKS-------- |
4 | 4uy3A | 0.03 | 0.03 | 0.97 | 1.33 | DEthreader | | IIEKAIERKNEIETL---PFDQNLAQLSLNLTKTKYDAMKKDNVESTNKYLAPVEEKIASEIDDANELMDSYEQSYQQQLEDVNEIIALYNYVQAHH |
5 | 6cq0A3 | 0.03 | 0.03 | 0.92 | 1.17 | DEthreader | | LIELIKDDYNETVHKKTEVVITLDFCIRNIIIHTKLLRLSSSQGTIETSLQDIDSRLLAWKMLHLRKQLLSLTNQCFDIEEEVSKYEYT-------- |
6 | 4apsA | 0.11 | 0.10 | 0.92 | 0.21 | HHpred | | GLSTLFMTEMWERFSYYGMRAILLYYMWFLLHRATAASIMAIYASMVYLSGTIGGFVADRGARPAVFWGGVLIMLGHIVL---ALPFGASAL----- |
7 | 6wm5A3 | 0.11 | 0.09 | 0.87 | 0.74 | DisCoVER | | -------LVVATLTC-LVTSQVISYIKARAESGLRGDGG--IIPERLIIVLVGAGVSDFAWPPALPVAMWVLAVASVITLGQRLHTVWTSPGAT--- |
8 | 5c65A2 | 0.11 | 0.09 | 0.86 | 0.22 | MRFsearch | | --QPIIISIVLQLSQQLSGINAVFYYSTGIFKDAPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLL------------ |
9 | 6m2lA | 0.06 | 0.06 | 1.00 | 0.82 | SPARKS-K | | KILSIVATFVMIISFAVSYGPVLWIYLHEMFPSEIKDSAASLASLVNWVCAIIVVFPSDIIIKKPSILFIVFSVMSILTFFFIFFFIKETKGGEIGT |
10 | 6wy9B | 0.03 | 0.03 | 0.99 | 0.87 | MAPalign | | PWTLDVARTALAAVQLGVASGALHITASYLAVQHQLADCYIEIEAMRVCLWQAVCAAEATDGKAALVAKWWADEGGLNVVHRTQHLHGGIGVDVDY- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|