>PF06217 (282 residues) MDDDGLNMRNWGYYEQPSLKGHLGLQLMSSMAERDTKPFLSGRDHGVILNPNGAFHPRDC AVSEAPVHMDYVRDSWVNHRDKFLNMLPGNPNFMVYPEPSATHPMQILQPPDTSNDERVV MEDQGVRKEGESLKKRTGGSTPKAPKPKKTKKGPSVPKENGNSSVQRAKPAKKNMDVVIN GIDMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTTISIYPLPMSTKRRGARIAGRK MSQGAFKKVLEKLASEGYNFSNPIDLRTHWAKHGTNKFVTIR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | MDDDGLNMRNWGYYEQPSLKGHLGLQLMSSMAERDTKPFLSGRDHGVILNPNGAFHPRDCAVSEAPVHMDYVRDSWVNHRDKFLNMLPGNPNFMVYPEPSATHPMQILQPPDTSNDERVVMEDQGVRKEGESLKKRTGGSTPKAPKPKKTKKGPSVPKENGNSSVQRAKPAKKNMDVVINGIDMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTTISIYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLASEGYNFSNPIDLRTHWAKHGTNKFVTIR | |||||||||||||||||||
1 | 3m1cA | 0.07 | 0.07 | 0.93 | 0.77 | DisCoVER | GDDGAPDGRRNAPPPGRYVYLSPSASTWPVGVWTTGGLAFGCDAALV-RARYGKGFMGLVISMIIVVPKTLARVGNPNAPAVLPGPPAGPRYRVFVRVAGYPEESTNYAQYMSRAYAEFLGEDP----------GSGTDARPSLFWRLAGLLASSGFAFVNVLERARGLLITTALCTSDHQKFVPEATAEPRILVPITHSYVVTHIGYKLLFITYLTATCIGAVFLRYTPAGEVMSVLLVDLAQGPNVFS--S-----DVPSVALLL-FPNGVIHLLAFDT- | |||||||||||||
2 | 3dx4A | 0.05 | 0.04 | 0.70 | 0.67 | DEthreader | ------------------------SHWRNVLLQLTTMILQKQITALFTHMM----Y--LSGDFFTW-YYTSRPYHKRMD--LMHYVREM-A---LEQAACVMQTLDDSRGSGSWHHDTLTK----------------T------------GVRSHGDRSGYLFLPNPAVSVVHQTIPEIRNV-TDLNQFIKRRR---PLANYYGMFIEDRLTSSELE---IMQD-LHI-----YRLVLEVLTSAAHKASQSLDPLDKGDVSVM-VLHRTNLM----M-TAAY | |||||||||||||
3 | 6lz1A | 0.06 | 0.06 | 1.00 | 0.77 | CEthreader | CLLNTLPWNVRGVITETEENKLVYFESCDGKGILTAAHTSLKHPAAAYQKDDNFILVNDHLRVTIAPNGLILSLFDLHKEREILDLKSGKNHAGANQYVLFEDTPLSWQAWDTEVFSLEKYEVLDKGKVSIKESVVDIPISELSHMKATISLEGYNDCSEFTGVNFTCEVDWHESCKFLKVEFPVDIHSEFASYETQFGITKRPTHYNTSWDVAKFEVCHQKFADYSDFTYGVSVLNDCKYGFSTHGNLMRSLLRSPKQPDAHADMGKHTIRYAVYPHSKPL | |||||||||||||
4 | 5le2A | 0.05 | 0.05 | 0.99 | 0.70 | EigenThreader | GADVNTADETGFTPLHLAAWEGHLGIVEVLLKNGADVNANDGHTPLHLAAYTGHVNATDVIGTAPLHLAAMWIVEVLLKNGADVRAQDKFGKTPKDLARDNGNEWIRELLEKAERKLKDLDRKLLEAARAGHRDEVEDLIKNGADVNTADETGFTPLHLAAWEGGADVNANDERGHTGAGVNATDVIGTAPLHLAAMWGADVRAQDKFGKTPKDLARDNGNDVNANDERGHTPLHLAAYTGHLEIVEVLLKN----GAGVNATTAPLHLAAMWGHLEIVEVL | |||||||||||||
5 | 4ny2A | 0.16 | 0.13 | 0.79 | 0.40 | HHpred | ---------------------NASVEVIKVLNQGGVKAFYF----------NAWHLDGIGDENEALEALKLALDGH----------IVGNHSYDHMIHNCVADCHQIHSYQDPVRDAASFEQNLITLEK--YLP-TIRSYPNY----KGYELARLPYTDPANPSNIQVQNILANQGYQTHGWDVDWWGIPMPANSLTEALNSCFPCLHADK------VIVLTHDFLFED---GKRGMGATQNLPKLAEFIRIAKEAGYVFDTMDNYTPRWSVGKTYQYVLY- | |||||||||||||
6 | 2pffB | 0.19 | 0.02 | 0.09 | 0.50 | MRFsearch | -DDYGFKQG-----------------------------------------------------MDLYKTSKAAQDVWNRAD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 5x6oG | 0.09 | 0.08 | 0.87 | 0.34 | FFAS-3D | -DDDDIGTRPPRFTQIPPSSAATQIEVTTTTLNNKQSKNDNQVNQLNKAQGEASM-LRDNIEREKEKNIQAVKVNELVKHLQELAKLKQELQKLEDEKKFLQRGKSKREVITNVK------PPSTTLNTITPDSSSVAIEAKPQSPQSKKRKISDNLLKKNMVPLNPNRIIPDETSLFLESI---------LLHQIIGADLSTIE-------------ILNRLKLDYITKFKNFVIAKGAPIGKSIVSLLLRCKK-----TLTLDIAVLIKEHPNESKLAV- | |||||||||||||
8 | 4btgA | 0.13 | 0.12 | 0.94 | 1.14 | SPARKS-K | KADAVGKVPPTAILEQTLAPSEH--ELFHHITTDFVCHVLSPLGFILPDAAYVYRVGRTATYPNFYALVDCVRASDLR---RMLTALSSVDSKMLQATFKAKGALA-----------PALISQHLANAATTAFERSRGNFDANPSTPKELDPSARLRNTNGIDQRGRAEVIFSDEELSSTIIPFKLRPINE-TTSYIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRDVEPGISDRMSATLAPIGNTFAVSAFVKNRTASNGAEMTLGFP | |||||||||||||
9 | 1nisA | 0.22 | 0.05 | 0.21 | 0.41 | CNFpred | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ICIGVGGADAVDVMAIPWELKCPKVI---GVKLTGSLSPKDVILKVAGILTVKG----------------GTGAIVEYH | |||||||||||||
10 | 5yz0A | 0.05 | 0.04 | 0.67 | 0.67 | DEthreader | ----EAEA-----------KF---QKVVRNICKALLDVL----GI-EVD------AEYLLGPLYAALKNPQEEIKHVDMNQKSI---------------KAESLQISYPEMLHSKKKKDALMVKFATAVYNVKDDSVHHVDLFC----------ADGKSTTWVRLGALSKVARRWLWVLCFPENGM-------------------FIYQKCLRKDAESRRRELHI-------SMVGCHTLMQEPLMSVLKTFLHDPVNKAKTHV-------------DIEQ- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |