>PF06207 (220 residues) LGADLTASQKKKVLELLDLDDNSDYKVITVTNKDEHEYLDSYLSSRVIGTRALSSVTVEQ KDDGNGVNVTTQNISYCTSGMYRNALITAGIKNADVKVAGPFKISGTAALVGVMKAYEEM TGKKIPEKSKDAATDELITTGEVAENIGSDDAEKLIADVKQKVAKDNLSSPSEIKQAIEE SAKDLNINLSDADREKIQSLMDKISGLDLNVSQLKEQAKD |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | LGADLTASQKKKVLELLDLDDNSDYKVITVTNKDEHEYLDSYLSSRVIGTRALSSVTVEQKDDGNGVNVTTQNISYCTSGMYRNALITAGIKNADVKVAGPFKISGTAALVGVMKAYEEMTGKKIPEKSKDAATDELITTGEVAENIGSDDAEKLIADVKQKVAKDNLSSPSEIKQAIEESAKDLNINLSDADREKIQSLMDKISGLDLNVSQLKEQAKD | |||||||||||||||||||
1 | 2f33A | 0.06 | 0.05 | 0.82 | 0.68 | DisCoVER | HLQSSL------I-------------TASQFFEIWLHFYKIGIVELAVLPTENFLLL-----------FRCQQLKSCEEFMKTWRHSGFILKNFLKLLKANKTVDDTKLAEYTDLMLKLFDSNNDG--KL-ELTEMARLLP--VQENFLLKFQGI-KMCGFNAFEGYID-ENELDALLKDLCEKNQELDIN-NISTYKKNIMALSDGKLYRTDLALILS- | |||||||||||||
2 | 1vz8B | 0.10 | 0.08 | 0.80 | 0.83 | DEthreader | --T-PRGF-ASAPATVAARGVVVLARAAEVRV---------------SVGATLVGIAK-G--G--LEPDAQDLFRRVDR-TFNAV-SIDTDTSSDTAVLFAFEELHTAALALVKDIAS----DGEGAAK--LI--EV-QV--TG-ARDDAQAKRVGKTVVNSPLVKTADPNWGRVAAI-GKCSDDDIDRVT--IRFGVVVIG-GC-DLTEGYVRLNS-YT | |||||||||||||
3 | 6e1jA | 0.06 | 0.06 | 0.98 | 0.66 | CEthreader | IARSKERDIKAAWESVKYAKRPRIVIFTSTSDIHLKYKLK--MTREEVVDMVASSIRFAKSLGFEDIEFGCEDGGRSDKDYICTVFEEAKAGATTLACPDTVGINMPHEYGKLVRYIKANTPGIDDTIAGICAGARQVEVTINGIGERSGNAPLEEVVMALKCRGAFVIDTRQIMATSKMVQEYTGLYVQPH--KPIVGANCFVHESGIHQDGILKNRST | |||||||||||||
4 | 1lfwA | 0.09 | 0.07 | 0.75 | 0.73 | EigenThreader | EEYPVGKGPVDAMTKFLSFAKRDGFDTENFAN---------------------YAGRVNFGAGDKRLGIIGHMDVIYGKGPSLTAYYGMPKKKIDFVLGTNEETNWVGIDYYLKHEP-----TPDPD------------------------LEAVKLAYESFLADKELVGKNSATFLALFLD---QYAFAGRDKNFLHFLAEV---EHTDPDTMIKQVLD | |||||||||||||
5 | 3fewX | 0.17 | 0.13 | 0.75 | 0.35 | HHpred | ------------------------------------------------LPREIDKYRVTLNDNGRAIGILREKINHKTPEIYEALAEDANVRKFDVDVGVRPYVGSEKAKAGIMEIYEAL-GFNNEEPQRQQAYDVAEVISDIGNKVGGDAYKSLAREIADDVKGKTIRSYDDAMASLNKVLSNPGFKFNRADSDALANVWRSI-----DAQDMANKLGN | |||||||||||||
6 | 1r6bX | 0.13 | 0.12 | 0.93 | 0.50 | MRFsearch | -----REKELERAIQVLCRRR--KNNPLLVGETAIAEGLAWRIVPEVMADCTIYSLDIGA-----NSILFIDEIHTIIAANLIKPLLSS--GKIRVIGSTTYQEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV--KYINDRHLPDKAIDVIDEAGARARLMKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTE | |||||||||||||
7 | 1ng6A | 0.11 | 0.06 | 0.60 | 0.71 | FFAS-3D | ------------------------------------------------------------------------------LERLNQDMKLYMNRE----------KDKLTVVRMVKASLQNEAKDSLTEDELTVLSRELKQRKDSLQEFSNANRLDLVDKVQKELDIPEQLSEEELRTIVNETIAEVGAS-SKADMGKVMGAIMPKVKGKADGSLINKLVSS | |||||||||||||
8 | 5cwjA | 0.15 | 0.10 | 0.72 | 0.78 | SPARKS-K | ----DSEEEQERIRRILKEARKSG------TEESLRQAIEDVAQLAKKSQD-----------------------SEVLEEAIRVILRIAKESG------------SEEALRQAIRAVAEIAKEAQD---SEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEDPRVLEEAIRVIRQIAEESG---SEEARRQAERAEEEIRRRAQ----------- | |||||||||||||
9 | 5kvuA | 0.15 | 0.12 | 0.84 | 0.56 | CNFpred | --------SMRYTCERLVR----GLDTIAATGNILRDYLTDLFPILETSAKMLSVVPLMA---GGGMYETG--AGGSAPKHVKQLVEENH-----------LRWDSLGEFLALGAGFEDIGIKTGNERAKLLGKTLDAAIGKLLDNDKSPSQFYLAMYWAQELAAQT--DDQQLAEHFASLADVL-----TKNEDVIVRELTEVQGVDIDSDMTTAVMRP | |||||||||||||
10 | 6d6kA | 0.08 | 0.06 | 0.70 | 0.83 | DEthreader | VREQV----T--RV----A--R-QANTVLITM-----------------GGVTVLVAVVAAAKQFPLTVNYQEAAELISRLIDRPIRPLFYYEIQVTATVVSSEADIAAMLGTSAALAIAGTRGPIGGTEAVL--M--VESEA--FMLIGHGRLA--GS--MG--LVKFA-VL-SDILGED-----KVAGGITA-LQ--MD-IKIEGI------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |