Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | LGADLTASQKKKVLELLDLDDNSDYKVITVTNKDEHEYLDSYLSSRVIGTRALSSVTVEQKDDGNGVNVTTQNISYCTSGMYRNALITAGIKNADVKVAGPFKISGTAALVGVMKAYEEMTGKKIPEKSKDAATDELITTGEVAENIGSDDAEKLIADVKQKVAKDNLSSPSEIKQAIEESAKDLNINLSDADREKIQSLMDKISGLDLNVSQLKEQAKD |
1 | 2f33A | 0.06 | 0.05 | 0.82 | 0.68 | DisCoVER | | HLQSSL------I-------------TASQFFEIWLHFYKIGIVELAVLPTENFLLL-----------FRCQQLKSCEEFMKTWRHSGFILKNFLKLLKANKTVDDTKLAEYTDLMLKLFDSNNDG--KL-ELTEMARLLP--VQENFLLKFQGI-KMCGFNAFEGYID-ENELDALLKDLCEKNQELDIN-NISTYKKNIMALSDGKLYRTDLALILS- |
2 | 1vz8B | 0.10 | 0.08 | 0.80 | 0.83 | DEthreader | | --T-PRGF-ASAPATVAARGVVVLARAAEVRV---------------SVGATLVGIAK-G--G--LEPDAQDLFRRVDR-TFNAV-SIDTDTSSDTAVLFAFEELHTAALALVKDIAS----DGEGAAK--LI--EV-QV--TG-ARDDAQAKRVGKTVVNSPLVKTADPNWGRVAAI-GKCSDDDIDRVT--IRFGVVVIG-GC-DLTEGYVRLNS-YT |
3 | 6e1jA | 0.06 | 0.06 | 0.98 | 0.66 | CEthreader | | IARSKERDIKAAWESVKYAKRPRIVIFTSTSDIHLKYKLK--MTREEVVDMVASSIRFAKSLGFEDIEFGCEDGGRSDKDYICTVFEEAKAGATTLACPDTVGINMPHEYGKLVRYIKANTPGIDDTIAGICAGARQVEVTINGIGERSGNAPLEEVVMALKCRGAFVIDTRQIMATSKMVQEYTGLYVQPH--KPIVGANCFVHESGIHQDGILKNRST |
4 | 1lfwA | 0.09 | 0.07 | 0.75 | 0.73 | EigenThreader | | EEYPVGKGPVDAMTKFLSFAKRDGFDTENFAN---------------------YAGRVNFGAGDKRLGIIGHMDVIYGKGPSLTAYYGMPKKKIDFVLGTNEETNWVGIDYYLKHEP-----TPDPD------------------------LEAVKLAYESFLADKELVGKNSATFLALFLD---QYAFAGRDKNFLHFLAEV---EHTDPDTMIKQVLD |
5 | 3fewX | 0.17 | 0.13 | 0.75 | 0.35 | HHpred | | ------------------------------------------------LPREIDKYRVTLNDNGRAIGILREKINHKTPEIYEALAEDANVRKFDVDVGVRPYVGSEKAKAGIMEIYEAL-GFNNEEPQRQQAYDVAEVISDIGNKVGGDAYKSLAREIADDVKGKTIRSYDDAMASLNKVLSNPGFKFNRADSDALANVWRSI-----DAQDMANKLGN |
6 | 1r6bX | 0.13 | 0.12 | 0.93 | 0.50 | MRFsearch | | -----REKELERAIQVLCRRR--KNNPLLVGETAIAEGLAWRIVPEVMADCTIYSLDIGA-----NSILFIDEIHTIIAANLIKPLLSS--GKIRVIGSTTYQEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV--KYINDRHLPDKAIDVIDEAGARARLMKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTE |
7 | 1ng6A | 0.11 | 0.06 | 0.60 | 0.71 | FFAS-3D | | ------------------------------------------------------------------------------LERLNQDMKLYMNRE----------KDKLTVVRMVKASLQNEAKDSLTEDELTVLSRELKQRKDSLQEFSNANRLDLVDKVQKELDIPEQLSEEELRTIVNETIAEVGAS-SKADMGKVMGAIMPKVKGKADGSLINKLVSS |
8 | 5cwjA | 0.15 | 0.10 | 0.72 | 0.78 | SPARKS-K | | ----DSEEEQERIRRILKEARKSG------TEESLRQAIEDVAQLAKKSQD-----------------------SEVLEEAIRVILRIAKESG------------SEEALRQAIRAVAEIAKEAQD---SEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEDPRVLEEAIRVIRQIAEESG---SEEARRQAERAEEEIRRRAQ----------- |
9 | 5kvuA | 0.15 | 0.12 | 0.84 | 0.56 | CNFpred | | --------SMRYTCERLVR----GLDTIAATGNILRDYLTDLFPILETSAKMLSVVPLMA---GGGMYETG--AGGSAPKHVKQLVEENH-----------LRWDSLGEFLALGAGFEDIGIKTGNERAKLLGKTLDAAIGKLLDNDKSPSQFYLAMYWAQELAAQT--DDQQLAEHFASLADVL-----TKNEDVIVRELTEVQGVDIDSDMTTAVMRP |
10 | 6d6kA | 0.08 | 0.06 | 0.70 | 0.83 | DEthreader | | VREQV----T--RV----A--R-QANTVLITM-----------------GGVTVLVAVVAAAKQFPLTVNYQEAAELISRLIDRPIRPLFYYEIQVTATVVSSEADIAAMLGTSAALAIAGTRGPIGGTEAVL--M--VESEA--FMLIGHGRLA--GS--MG--LVKFA-VL-SDILGED-----KVAGGITA-LQ--MD-IKIEGI------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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