Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MVEDVCNVDLEQGLDLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEFLNDLFTEFSKFHNSYYPDGRISTRSNFRWPLLIIWSIIIVFAVDKKFEVQKFLSIWINENRFYSEIWVPIAIYVCLLVLMLLSLI |
1 | 3ixzA2 | 0.05 | 0.03 | 0.73 | 0.68 | DisCoVER | | KGLAPNALLVPQQATVIRDGDKFQINAD----Q--LVVGDLVEMRVPA-DIR--ILQ-AQGRKV-DNSSLTGESEPQTRSPECPLETR--NI--AFF---S--------TM--C-----LEGTAQGL--VV-NTG-DTIIGR- |
2 | 5xtcr1 | 0.10 | 0.08 | 0.80 | 0.83 | DEthreader | | NNSDPLT-------PLLLTTWLLLTISKYLSMLIFLQISLITFTATELIFYI-FFETTLITL-NAGTYF--------FYTVGSLPLYMAFMVKMPL--Y-------H--WLPKAHVEAPGSMVLAAVLLKLGGYGMMRLTLIL |
3 | 5jkiA | 0.05 | 0.05 | 1.00 | 0.52 | CEthreader | | ISKAAVLIRQPWLNEVMTGITHLGASSFLLPLIVIIGAGMFFYRKTWDGLLMLLVFGTDRLLNKVLKEWIERVRPDFAPLVHESSFSFPSGHSMNAACVYPVIAYFAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFD |
4 | 1jb0B2 | 0.04 | 0.04 | 1.00 | 0.58 | EigenThreader | | FHTLGLYVHNDVVQILIEPQAAHGKLVWLPGWLDAINSGSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGISAWDAFYLAMFWMLNTLNSLSVWAWMFLFGHLVWATGFMFLISGLAHFSVGYILTYAAFLIASTAA |
5 | 4f1nA3 | 0.17 | 0.12 | 0.71 | 0.30 | HHpred | | ----------VLGSDVTHYPEKDQNSIASYDDKFTQFPGDYMLQDPGEEIITN-VGSLMLNRLKIYQKHNNGKLPTKIMYFRDGVSFSQV------------VKIEVKESVRKFGPQNKYDPPV------------------- |
6 | 6d0jA | 0.07 | 0.06 | 0.76 | 0.27 | MRFsearch | | -------------------------------ALEVLVIGK----FSHHALLPALLAAFTASTTSQWLGLEKFSLMLPQSVDLTIPVFLKLLVIGLIFGMVGGSFAGCLETMKRIMKRRFPNPLWRIGIGALALVLLFVLLYQG |
7 | 6lumD | 0.06 | 0.06 | 0.92 | 0.54 | FFAS-3D | | --APVMEREHDRPAALDHPRAPRKPRGIPYFEKYAWLFMRF----------SGIALVFLALGHLFIMLMGVYRIDFNYVAERWASPFWQIWDMALLWLAMIHGANGMRTIIGDYARKNVTKFWLNSLLLLATGFTLVLGSYVL |
8 | 7abhu | 0.07 | 0.07 | 0.98 | 0.68 | SPARKS-K | | GAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRLLIDEDYYARVEGREIISNLAKAALATMISTMRPDI---DNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAI |
9 | 1h2vC | 0.12 | 0.07 | 0.58 | 0.65 | CNFpred | | ---------------------------------------------------YNFGGEFVEAMIRQLKESLKA---------NYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEVPQVRRDWYVYAFLSSLPWVGKE |
10 | 6xmpA2 | 0.05 | 0.04 | 0.89 | 1.00 | DEthreader | | VFDDI---LE-SQLRDL-L--TWVYL---LKYQTIRKQRPQSGIFNYIMGSILSQFAVHIATLVYITTEIYKL------EPRPSLLNTGIFIIQLVQQVSTFAVLLVTGLALASTFLPNPMTDFKIKLTLTLLLDFFGSWGVE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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