>PF06193 (271 residues) MDFFNKFSQGLAESSTPKSSIYYSEEKDLDIKKDEAIEIGLKSQESYYQRQLREQLARDN MMAASRQPIQPLQPTIHITPLQVPTPAPTPKPRQQQTNTSSDMSNLFDWLSADDNTQPSS LLPALTPINAVQDIISKFNKDQKTTTTPSTQPSQTLPTTTCTQQSDGSISCTTPTVTPPQ PPIVATVCTPTPTGGTVCTTAQQNPNPGATSQQNLDNMALKDLMSSVEKDMRQLQAETND LVTNVYDAREYTRRAIDQILQLVKGFERFQK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | MDFFNKFSQGLAESSTPKSSIYYSEEKDLDIKKDEAIEIGLKSQESYYQRQLREQLARDNMMAASRQPIQPLQPTIHITPLQVPTPAPTPKPRQQQTNTSSDMSNLFDWLSADDNTQPSSLLPALTPINAVQDIISKFNKDQKTTTTPSTQPSQTLPTTTCTQQSDGSISCTTPTVTPPQPPIVATVCTPTPTGGTVCTTAQQNPNPGATSQQNLDNMALKDLMSSVEKDMRQLQAETNDLVTNVYDAREYTRRAIDQILQLVKGFERFQK | |||||||||||||||||||
1 | 6raoI1 | 0.06 | 0.04 | 0.65 | 0.77 | DisCoVER | RTGKGLLNLMA------YTEAVPFA-------TDADWKDWM-----AGCTLEALSD-----IYQYPGLAEKKLPQQAFLLALLHLLENTVPARHRSLYYRDFA-PR-APQ--------------------P--DS--VA--VSFTLQSSPYALPAGSLLDGGQDSAGNSITYQTDDSLLITGTTLNVAQDSHFLPANTINQLVA------AISDVR------Q--P---L--------------------PS--VG-GQPRE-TEMAML-- | |||||||||||||
2 | 5uv0A | 0.08 | 0.06 | 0.68 | 0.67 | DEthreader | SYYSMEAWQFTSKHLMMDVF---------------VAEQAK--AL--PL-HWK--------APMLEAR--------WFIHYLKLFN--QAYQEELISNRLVASFLWSMGIAFEQFACRVLTSIAITIDSITGPWSSKIFRLQ--------------SSDEIRGDV-P----------------------KS-IQCYM---------TGASEEVAREHIK-DMM-RQMWKKVNAYTA-DKDSPLTRTTAEFLLNLVRMSHFMYLHGDGHGVT | |||||||||||||
3 | 2wkeA2 | 0.09 | 0.07 | 0.79 | 0.57 | CEthreader | ------------------GTEVAAESAPGRRGEVQDLYLVGRGDPTLSAEDLDAMAAE-----VAASGVRTVRGDLYAD------------------------DTWFDSERLVDDWWPEDEPYAYSAQISALTVAHGERFDTGVTEVSVTPAAEGEPADVDLGAAEGYAELDNRAVTGAAGSANTLVIDRPVGTNTIAVTGSLPADAAPVTA----LRTVDEPAALAGHLFEEALESNGVTVKGDVGLGGVPADWQDAEVLADH------- | |||||||||||||
4 | 2o3eA | 0.05 | 0.05 | 1.00 | 0.62 | EigenThreader | NCLQVLADIEVTYIVERTMLDFPQHVSSDREVRAASTEADKKLSRFDIEMSMREDVFQRIVHLQETCDLEKIKPEARRYLEKSIKMGKRNGLHLSGEAEREFILSLKKKECEERGFEYDGKINAWDLHYYMTQTEELKYSVDPDAHVWNKSVATGEVLGQFYLDLYACFGLQPGCLLPDGSRMMSVAALVVNFSQHVMHQICAQTDFARFSGTNVERDFVYLWSEVFSMDMFHSCFKKEGIMNPEVGMKYRNLILDMLQNFLQAFLMSRGL | |||||||||||||
5 | 3szrA1 | 0.12 | 0.11 | 0.89 | 0.33 | HHpred | -SVLEALSGV-AVTRCPLVLKLKKL-VNE-DKWRGKVSYQISDASEVEINKAQNAIAGEGM-GISHE-------LITLESSRDLTLIDLPGG-----NQPADKTLIKKYIQRQET-ISLVVVPSNIATTEALSMAQEVDPEGDRTIG---------ILTKPDLVDKGTVVDVV-LVFHLKKGYMIVKCRGQQEQLSLS-EALQRNHPYDLLEPCLTCKSLPLLENQIKETHQRITEELQKYGVDTSDKRKFLKERLARLTQARRRLAQFPG | |||||||||||||
6 | 4cgkA | 0.14 | 0.07 | 0.48 | 0.40 | MRFsearch | --ESKKLEGE-----------------------ITELSKNIVSRNQSLEKQARSAQTNG------------------------------------------AVTSYINTIVNSKSIT-----EAISRVAAMSEIVSANNK--------------------------------------------------------------------MLEQQKADKKAISEKQVANNDAINTVIANQQKLADDAQALTTKQAELKAAELSLAAEKATAEG | |||||||||||||
7 | 5ijnF | 0.16 | 0.12 | 0.77 | 0.53 | FFAS-3D | --ILAKWNQLQAFWGTGKG--YFNNNIDGLVVLVNKKETEIRSQQQQLVESLHKVLGGNQTLTVNVEGTKTLPDDQTEVVIYVVERSPNGTSRR------VPATTLYAHFEQ----------------ANIKTQLQQLGVTLSMTRTPAQNPPAGVDPIIWEQ------------------------------------AKVDNPDSEKLKVQDQMTKQHQTRLDIISEDISELQKNQTTSVAKIAQYKRKLMDLSHRTLQVLIKQEIQRK | |||||||||||||
8 | 5voxO | 0.08 | 0.08 | 0.94 | 0.71 | SPARKS-K | SKTDSWFNETLIGGRAFVSDFKIPEFKIGSLDTLIVESEELSKVDNQIGASIGKIIEILQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANNSAKTNLAAAERKKTGDLSVRSLHDIVKPEDFVLNSTTV----LVAVSKNVVPASASVIA------EDAEYVLFNVHLF-----KKNVQEFTTAAREELIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFHIKALRVYVE | |||||||||||||
9 | 4zm5A | 0.09 | 0.04 | 0.51 | 0.45 | CNFpred | -----------------------------------------------------------------------------------------------------QIAGYNNAMNVIY------GQAAPKVSDLQETLIGRFSSAFSALPETLDN--------------PEKLTIEPSV-KNQQLPLTVSYVGQT---AEGAQMKLA------QYIQQVDDKVNQELEKDLKDNIALGRKNLQDSLR--TQEVVAQEQKDLRIRQIQEALQYANQ | |||||||||||||
10 | 5dfzC | 0.06 | 0.04 | 0.74 | 0.67 | DEthreader | GHKPLKPSPFRNSRTWDYWLTLIRIKQLTFSSHLRTSITLGFESLKVTKLKQRENR------------TWPTFVLN----------------NANLDK-QVKKYRYY--N-----------VLELMDSEYVNRLKKLEFLIRRALVPGSNDQRLIVLCCIKTTAK-MELLVLLTVPKVRPICDVCPSKVFK--SSLSPLKITFKTTLNQPYHLMF--IP-DTLASHLDNLADFGYIQDPFDIRIDPNG----------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |