>PF06181 (290 residues) TLEWLGLLFRWLHVLFAIMWVGNSFHFNWMDIHMKKPKKAKPGVLGELWMLHGGSFFHLE KKEVNPKQIPGLIHWFKYESYFTWVTGFLLLSIVYYFNGGIYLLDPSVSDLTNHQAIHLG AGTLLFGWLFYDQLWRRKFAQNNPAFGSLITFVAIIAATYFLSTQLSGRAAFLHIGALMA TIMTGNVFFHIIPNQKKMMAMAYSGQKPDPSIGARAKMRSVHNNYFTFPVLFMMLSNHSP STFSTDLKWLVLLLLILGSVAIKHFLNIRENFKSWKIASLASGFITVALI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | TLEWLGLLFRWLHVLFAIMWVGNSFHFNWMDIHMKKPKKAKPGVLGELWMLHGGSFFHLEKKEVNPKQIPGLIHWFKYESYFTWVTGFLLLSIVYYFNGGIYLLDPSVSDLTNHQAIHLGAGTLLFGWLFYDQLWRRKFAQNNPAFGSLITFVAIIAATYFLSTQLSGRAAFLHIGALMATIMTGNVFFHIIPNQKKMMAMAYSGQKPDPSIGARAKMRSVHNNYFTFPVLFMMLSNHSPSTFSTDLKWLVLLLLILGSVAIKHFLNIRENFKSWKIASLASGFITVALI | |||||||||||||||||||
1 | 4a01A | 0.09 | 0.08 | 0.89 | 1.00 | DEthreader | CWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAAD------PPVIADNVG------DNVG---------D--IAGMGSDLFGSYAESSCAALVVAAMLFTIFNVQK-DV-KS--WQLFLCVAVGLWAGLIIGFVTEYYTSVALGYKSVIIPIFAIAISIFVSFTFA-AMYGIAVAALGM-LSTIATGLAIDAYGPISDNAGGIAMIRTDDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRSITTVDVL---IGLIVGAMLPYWFSAMTSEPPALVMLTPLVGGVSLAA | |||||||||||||
2 | 6cc4A | 0.04 | 0.04 | 0.95 | 1.08 | SPARKS-K | ADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFS-------IPAFAPTLLNISMIGFAAPYFNPPV---LALAWAVTVGGVLQLVYQLPHLKKIGMLVLPRINFHVVKQMGPAILGVSVSQISLIINTIFASFLASGSVSWMYYADRLMEFPSGVLGVALGTILLMDWGLRLCFLLALPSAVALGILSGPLTVSLFQYGKFTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSRQIKTPVKIAIVTLILTQLMNLAFIGPLK----HAGLSLSIGLAACLN | |||||||||||||
3 | 3rkoB | 0.10 | 0.09 | 0.86 | 1.26 | CNFpred | --GYSRFFAYTNLFIASMVVLVLADNLLLMYL---------------GWEGVGLCSYLLIGFY-----DPKNGAAAMKAFVVTRVGDVFLAFALFILYGTLNFREM-GNNMLMWATLMLLGGAVGKSAQLQTWLADAMAG-PTPVSALIHAATMVTAGVYLIARTHGLFVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYS--------TMSQIGYMFLALGVQAWDAAIFHLMTH----------AFFKALLFLASGSVILACHHEQNIFIPLVYLCFLVGGAALSAL | |||||||||||||
4 | 4a01A | 0.08 | 0.07 | 0.87 | 1.00 | DEthreader | YWGGLFEAITGYGLGGSSMALFGRVGGGITKAADVGAV--PRNPAVIADNV---GDNVG-------------DIAGMGSDLFGSYAESSCAALVVAFGFTIFNFVQK--DVK-SWQLFLCVAVGLWAGLIIGFVTEYYTSPVLGYKSVIIPIFAIAISIFVSFTFAA-MYGIAVAALGM-LSTIATGLAIDAYGPISDNAGGIAMIRTDDAAGNTTAAIGKGFAIGSAAVSLALFGAFVSAITTVDVL-VFGLIVGAMLPYWFSAMTMKSVGS----------GV-AG-- | |||||||||||||
5 | 4av3A | 0.10 | 0.09 | 0.89 | 1.00 | DEthreader | TNNFPAMTVSGYALGCSIIAMFDRVGGGVYTKAADAA---NPATIADNVG------DNVG---------D--VAGLGADLLESFVGAIVSSIILA-SYMFPIYVQHQVPKETIQALISYPFTPSAIIGIFSGILIGFWAEYYSVFPPTLTLVLGILFADYFAG-------LY-GVAIAALGM-LSFVATSVSVDSYGPIADNAGSTDDANTTAAIGKGFAIGSAIFAALSLFASYMFSQISDPPSLVLLLNM-VIGALGAAITYYFSGYLISYPFIAILTPLTGGAEVKH | |||||||||||||
6 | 6elhA | 0.09 | 0.08 | 0.90 | 1.06 | SPARKS-K | MSDWFPALTRTWHIQSAIFWIATGFLTAGLFLAPIVNGGKD------------------------PKFQRAGVNFLYIALFIVVGGSYAGNFFALTHILPFGHQGYEYLDLGRFWQLLLMVGLLLWLFLMLRCTVSAFKEKGVDKNLLAIFVASMVGVGYAPGLFYGEIAVMEYWRWWVVHLWVEGFFEVFATAAFAFVFYNMGFVRR-----STATASTLAAAAIFMLGGVPGTLHHL-YFSGSTSASMAIGACFSALEVVPLAYEHWSYQKRLRWPLMCFVAVAFWNM | |||||||||||||
7 | 4he8F | 0.06 | 0.05 | 0.81 | 1.23 | CNFpred | ----------LLALAGLLLFLGAVGKSAQIP--------------LMVWLPDA--------------------MAGPTPVSALIHAATMVTAGVYLIARSSFLYSV----LPDVSYAIAVVGLLTAAYGALSAFGQTD---IKKIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIHALG-RKMGGLWKHLPQTRWHALIGALALGGSGFWSKDAILAATLTYPFGGV-GFYVGALLVAVLTAMYAMRWFVLVFL-EAPPVMLWPNHLLALGSVL | |||||||||||||
8 | 4av3A | 0.07 | 0.06 | 0.86 | 1.00 | DEthreader | QVLPFAMTVSGYALGCSIIAMFDRVGGGVYTKADMAADLVGKNPATIADNVG--DNVG--------------DVAGLGADLLESFVGAIVSIIAIQALLLQG-LDVLGFRFGA-ISPWFSAIIGIFSGILIGFWAE-YYTSTLGMKSVFPPTLTLVLGILFADYFAG-LYGVAIAALGM-LSFVATSVSVDSYGPIADNAGGISLRTDDAVGNTTAAIGKGFAIGSAIALLFASYMFSQILVLLLNM-------GALLGAAITYYFSGYLISA-------V-IGT-L--- | |||||||||||||
9 | 4ikvA1 | 0.09 | 0.06 | 0.62 | 0.68 | DisCoVER | -ASIDKI--AA-SVPQRGFKGLFTLFFT--E-------------------FWERFSY------YGM-RAI------------------------LVYYMYYEVGG--LG-LDEHLALAIYGALVYMSGIIGGWLADRVF--GTSRAVFYGGL-LIMAGHIALAIPGVAALVSMALIVLGTGLLKPNVSSIGINLGALAPLVVGTAGMGFG-LAAVGMFLGLVVFVATRKKN--LG--LAGT-------------------------------------------YVPNP- | |||||||||||||
10 | 5twvB | 0.08 | 0.06 | 0.75 | 0.83 | DEthreader | LAGLALLLQRTFLQASYYVAIETGINL-RG--IQTKIYNKHMST------NLVAIDT-N-------------QLMWFFFLCPNLWTMPVQIIVGVILLYYI-------LGVSALIGAAVIILLAPVQYFVATKLSQAQRTTLS-LFVYTSISIFMNTAIPIAAVLISLSLFHILVTPLFLLSSVVRSTV-KALVSVQKLSEFLS-------------T--QH--ST--C---S--L-----SALTVI----------Q--RASRDLQQLDTAFLAANRWLEVCMEIGAVA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |