Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | TDVVLIVFIALLLAYAIYDEFIMNMMKGKTRLQVHLKRKNKIDCAIFVGLIAILVYNNVMANGAPLTTYLLVGLALIAVYISYIRWPKLLFKNTGFYYANAFVEYSRIKSMNLSEDGILVIDLEQRRLLIQVKQLDDLEKIYHFFVEN |
1 | 5wq7A | 0.08 | 0.06 | 0.76 | 0.58 | DisCoVER | | ---------------------------RAQVLVEAII---VEVQDGNGLNLGVQWA--NKNVGFFNGDWGVLLTALASNNKNDILATPSIVTLDVTPQVNVLLEIEQTVVLGGDFSKEQVSKVQLFRYTSTERAK-RN-LMVFIRPT- |
2 | 1tqqA | 0.07 | 0.05 | 0.70 | 0.83 | DEthreader | | --------------ENL-Q------------------TDQTILNTATAYFNVLNAIDVLSYTQNELTARNNLDNAVEQLRQITGNYY-LAA----LN---VENF--KT-DKPQVLVSFNISIINAANYNQLKLNEQDLLALNNALSKV |
3 | 2v06A | 0.06 | 0.06 | 0.96 | 0.56 | CEthreader | | ASVLSAATATDQGPVRENNQDACLADGILYAVADGFGARGHHASATALKTLSAGFAAAPDRDGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNI------GDSPLYRIRDGHMEQLTDDHSVAGELVRMGEITR |
4 | 4gouA | 0.06 | 0.06 | 0.95 | 0.82 | EigenThreader | | KVGEKLNSGLKLCSIGPVIEEFDKQQKTSVLQ----LVYPYFRVRTYQAYVDDFIKIT---KKDSQEVKELEVVHSQLAIFQELINTYSLIILYRGVVVTDFTLIDIRDFGTEDSTETIYIDVEIKKIWFGCESTEEFKSCVEALRTI |
5 | 6upkH | 0.15 | 0.12 | 0.84 | 0.36 | HHpred | | --------------------LDPPIKQGQTRYILLFSKDEDISLTLNMEEVE-KRFERLTMSG-SLYEMVSRVMK--ALVNRKITVPGLYPLERGFIYVPVHIRFDEISFVNFARGTDFEIEKQGTQYTFSSIEREEYGKLFDFVNAK |
6 | 4aw6A | 0.13 | 0.12 | 0.97 | 0.58 | MRFsearch | | --LATLFSALAGLPWSLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFGKLKEEIEVM---AKSIDFPLTKVYVVEGSNKRIVLFDTKNEEVLAVLGHELGH |
7 | 6d2qA | 0.13 | 0.11 | 0.85 | 0.55 | FFAS-3D | | -----------LTRYLFALQIKHDLACGRL----------TCNESSAALLVAHIVQSEIGDFDEVQCKQHLLNAESDYQLLEIARRLELAVAHSGVLVFQNAFNWSKVRKLSFKRKRFLIKLRCQDTLEFMMGSRDCCKVFWKICVE- |
8 | 4ro5A | 0.07 | 0.07 | 0.91 | 0.60 | SPARKS-K | | LPSIVVGPLVVLIQLTQYWRYLELTRP----------ADLQADVVTRAGLLAAVAVASAGNRQEFQKYGAVAVRLAAGALIDGQEARDKA-TRDGG-SVSYAIAGEEAARIDLNPNAYFAVLYDEARATVTTTR-RTAPSLVNRLRAA |
9 | 3rkoB | 0.14 | 0.12 | 0.87 | 0.64 | CNFpred | | TPVSALIHAATMVTAGVYLIARTHGLFLMT--------PEVLHLVGIVGAVTLLLAGFAALVVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLA-----------SGSVILACHHEQNIFKMGGLKSIPLVYLCFLVG |
10 | 6c9kA | 0.10 | 0.07 | 0.74 | 0.83 | DEthreader | | EG-ISEERIAWLLKLILRYME-MV-----N---VLGGSAKDVCRTIARRALRKVLTVTRE-F-G--IGAEAAAYLLALSDLLFLLARVIE-----GKK-----LEAARAGQEVR---ILM--------ANGA----DVNATPLHLAAW |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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