>PF06159 (234 residues) LTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQRLNLSASSAAVAELKP DCCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKMYFRKFFKFQVLKPLDVKTKFYNAESD LSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSMMYNVAELNTVDTAGESESTFGSRTYLQ PMDTRQYLYCLKPKQEFAEKAGVIKGVTVIGKLDIVWKTNLGERGRLQTSQLQR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQRLNLSASSAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKMYFRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSMMYNVAELNTVDTAGESESTFGSRTYLQPMDTRQYLYCLKPKQEFAEKAGVIKGVTVIGKLDIVWKTNLGERGRLQTSQLQR | |||||||||||||||||||
1 | 3k71G4 | 0.10 | 0.09 | 0.95 | 1.13 | EigenThreader | PVLWAEIPRSAFQTLVQSNICLYIDSRDLQSSVTLDLALDPSPRATFQETKNRVRVLGL--KAHCENFNLLLPSCVPITLRLNFTLVPMLAADAQRYFTASLPFEKNLGISFSFPGLKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPA-GLSYRYVAEGQKQGQLRSLHLNHLIFRGGAQITFLATFDVSPK------AVLGDRLLLTANVSSENNTPRTSKT--TFQLE | |||||||||||||
2 | 1fieA | 0.14 | 0.11 | 0.81 | 1.47 | CNFpred | --------NAVLGKDFKLSITFRNNSHNYTITAYLSANITFYVPKAEFKKETF-DVTLEPLSFKKEAVLIQAGELEQASLHFFVTARIN-ETRDVLAKQKSTVLTPEIIIKVRGTQ------VVGSDMTVTIQFTNPLKETLRNVWVHLDGPGVTRPMKKM--------------FREIRPNSTVQWEEVCRPWV------------SGHRKLIASMSSD--SLRHVYGELDVQ | |||||||||||||
3 | 2qsvA | 0.10 | 0.09 | 0.84 | 0.64 | DisCoVER | VSNARLLFPISPEDEGVVRLVVNNTD-ESDLQVAVVSLPSF------VSLDDRAF-RLQAREPRELNLSLAVPRPPGKDEPLVLEVTSPETGKKAVDSVVSLPLVDNVELSTYLDG-----QLDGETTKAAIEIRNVGAGPLRLHSVTTR-N--PALTAV------------PD-RTEIKPGGSTLLRIAVDPQ--VK----AEGWQSIAADISIICNDPQ--APLRRIKVKA- | |||||||||||||
4 | 3lxuX | 0.05 | 0.04 | 0.83 | 0.83 | DEthreader | -NTPVFVPERA--T-W-AELRR-ITDPNRGDIGKFFVHTNQLLSCRETKIV-S-V-GSE--NESI--AFK-V-KSGRILELCIAKYWSN-YGQSHLKYSLRFRG-EAHNPNAVHAG-----------RGIHKLEIEAL-VAEDVQPQLQLKNALPLTLDFYENQC---GR-KY-VSSPLRLSTRVLYIAPITQERLTKAN-P-A-QCAWLSGNLVFPQD--VGRVAQHPFTYIL | |||||||||||||
5 | 4kkpA | 0.10 | 0.09 | 0.91 | 0.79 | CEthreader | NLSLNQNQLASNGGYISSQLGIRNESCETVKFKYWLSIKGPEGIYFPAKDTAQQESDALTDGRLNVTRGFWVPEYADGKYTVSLQVVAENGKVFKANQEFVKGVDLGLTIDIKNQFGINSVESTGGFVPFTVDLNNGREGEANVEFWTAVGPDGLIIPVNA------------REKWVIASGDTYSKVRGINF---------DKSYPAGEYTINAQVVDIVSGERVEQSTVVKK | |||||||||||||
6 | 4kkpA | 0.11 | 0.09 | 0.82 | 1.05 | EigenThreader | -----VQNQLASGGYISSQLGIRNESCETVKFKYWLSIKGPEGIYFPAKAVVESDALTDG--RLNVTRGFWVPADGKYTVSLQVVAE----NGKVFKANQEFVKGVDGLTIDIKNQ---FGINSTGGFVFTVDLNNGREGEANVEF-WTAVGPLIIPV---------------NAREKIASGDTYSKVRGINFDKS-------YPAGEYTINAQVVDI----VSGERVEQSTVV | |||||||||||||
7 | 1f13A | 0.15 | 0.12 | 0.81 | 0.63 | HHpred | ------VENAVLGKDFKLSITFRNNSHNRTITAYLSANITFYTGVKAEFKKETFDVTLEPLSFKKEAVLIQAGELEQASLHFFVTARINERDV--LAKQKSTVLTIEIIIKVRGT------QVVGSDMTVTVEFTNPLKETLRNVWVHLDGPGVTRPMKK--------------MFREIRPNSTVQWEEVCRPWVSGHRKLSSDSLRHVYGELDVQIQ---------------- | |||||||||||||
8 | 2qsvA | 0.11 | 0.08 | 0.72 | 0.58 | MRFsearch | --------------EGVVRLVVNNTD---ESDLQVAVVSL--PSFVSLDD---RAFRLQAREPRELNLSLAVPRPPGKDEPLVLEVTSPETGKKAVDSVVSLPLVDGVELSTYLDGQL-----DGETTKAAIEIRNVGAGPLRLHSVTTRN-PALTAVP---------------DRTEIKPGGSTLLRIAVDPQVK------AEGWQSIAADISIICN---------------- | |||||||||||||
9 | 2qsvA | 0.11 | 0.09 | 0.86 | 0.76 | FFAS-3D | LQVSNAFPIS-PEDEGVVRLVVNNTDESD-----LQVAVVSLPSFVSLDDRA---FRLQAREPRELNLSLAVPRNPPGKDELVLEVTSPETGKKAVDSVVSLPLVDNLTAAQTGVELSTDGQLDGETTKAAIEIRNVGAGPLRLHSVTTR-NPALTAVP---------------DRTEIKPGGSTLLRIAVDPQVKAEGWQSIA------ADISIICNDPQAPLRRIKKAEL-- | |||||||||||||
10 | 4kkpA | 0.14 | 0.12 | 0.87 | 0.85 | SPARKS-K | LNLASNGG------YISSQLGIRNESCETV-KFKYWLSIKGPEGIYFPAKAQQESDALTDG-RLNVTRGFWVPEYADGKYTVSLQVVAENGKVFKANQEFVKGVSLPLTIDIKNQFGINSVESTGGFVPFTVDLNNGREGEANVEFWTAVGPDGLI-IPVNA-----------REKWVIASGDTYSKVRGINFDKSYPA-----------GEYTINAQVVIVSGERVEQSTVVK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |