>PF06152 (354 residues) LSPEYIDHLPDRVVELYADLEIRILEDMARRISKTGALTETAQWQMWRLEQIGAEREFIR YHLQRLTGKTQGEINELLAEAGEKALYYDDQIYRAAGLSPKALRDSEALQKIIKAGSDKT MRLFENLTSTTADTASRQFENALDAAYMDITSGAFSYQDAVRSAVKSLSKAGIDAIIYPS GHTDKMDVAVRRAVLTGVNQTTARMQIARADEMECDLVETTAHMGARPEHMDWQGRIFSR SGKSRKYPDFVKSTGYGTGPGLCGWNCRHSFFPYFEGLSERAYSRAKLREYENKTVTYNG RTLPYYDATQQQRYLERQIRRWKREYLAMDAAGLDTSEASAKLAAWRAKQKDFL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LSPEYIDHLPDRVVELYADLEIRILEDMARRISKTGALTETAQWQMWRLEQIGAEREFIRYHLQRLTGKTQGEINELLAEAGEKALYYDDQIYRAAGLSPKALRDSEALQKIIKAGSDKTMRLFENLTSTTADTASRQFENALDAAYMDITSGAFSYQDAVRSAVKSLSKAGIDAIIYPSGHTDKMDVAVRRAVLTGVNQTTARMQIARADEMECDLVETTAHMGARPEHMDWQGRIFSRSGKSRKYPDFVKSTGYGTGPGLCGWNCRHSFFPYFEGLSERAYSRAKLREYENKTVTYNGRTLPYYDATQQQRYLERQIRRWKREYLAMDAAGLDTSEASAKLAAWRAKQKDFL | |||||||||||||||||||
1 | 6xz6A | 0.09 | 0.05 | 0.48 | 0.83 | DisCoVER | ----EAELEQ--TK--A-----------------------LCEVAK-QL--RK-LPLLTE-ER---RFEAV-GALEESKKAAKEGK-KAAKRAEAGAQAAKRA--REAATVAY-EASVRAEAAA-MEVKRFARALDSFESEYESVFSGLLRACATAVADDV--TPEALT-RAAHNLRLYMDFAEEAANKLEELQVRAADAADDAKSEAQE-EA-----------------------------------------------------------AQF-PE---------------------------------------------------------------------------- | |||||||||||||
2 | 4l3tA | 0.06 | 0.05 | 0.71 | 0.67 | DEthreader | FREDTNNLSTFQNLLSVYAT-PLRLDFWQEGWFKFNMGAFTDNERIFSQHVVSGGDLQL-FHTHYPNARFFTYG-TT-AF--SL-SSLLTSGPSYIEFERIEALLHIEIQMH--QS-TSFGLMLTSYIAS-------------H--------------------------------ALKDIE------------------M-YF-T-AQQIELTGMSASPHVLPDDSHTYEQGVLFSSMLWSEIFNNP-------------------------LVMTQELAGSLYASIRAGRTLTPAVKPMETVPYTDDHASLILARLMTAKFLHTEIREGGAPNETQSFGAVDWASGLVSDRY | |||||||||||||
3 | 6g3dA | 0.09 | 0.08 | 0.98 | 0.52 | CEthreader | LANAGKRMFLRDQLLRTIEAVIGYREAVVHKAADHLDTITLGHYLMAISENLAKNLDRYRELYARINLCPAAATAGTGWPLNRDRTSALLGFDGLVVNSIEGVAGWDHVAEHAFVNAVFLSGLSRLASEIQLWSTDEYQVAELDASFAGTSSIQKKNPDSLERSRKAAFAAMGPLVGILTSLSIDALIAATHAMTGVVRTLHPNKERMRQYAAESTMTDLTDMLVRRVGIDYREAHEIVAH--------VVITAIEKGIKANKIGLDLVQEAAVAQTGAGINVSADDIKDALDPWQNVLRREGKGMPPMSVKASIDDAMAELHKDRAWLANATQALANAKQTLADSVQQIIQTD | |||||||||||||
4 | 5l22B | 0.06 | 0.06 | 0.93 | 0.63 | EigenThreader | VLRSYLAKYKLIIVGLFSLFINILFYMLAVYDIVVPSTSVP--TLLVITALAVVLYFALGLLQSVRAKVMQIISLKLDSELNKEVFTSSFEYAIRNPSK----ASAQPINDLYQLKQFLTSPVLFAIFDYYGVMAILSMAVIVALAILNEYITDRNNFLSNLTRIFRIMAQSLMLEITTGMIVAGSILLGRILQIGNTKVAYTRLNEFLKFLPEPKGNVVVVPPEGKT-----PVLRNILPGEPSGSG--------------KSSLVRTILGIWLGAKQWDRDYFGKFVGYPQDIELFEGTVAENIAEKIIEAAKLSGAHDVIIKLGQRQRIALARALQGEQALYNALIELKKR | |||||||||||||
5 | 4rndA | 0.08 | 0.03 | 0.40 | 0.27 | HHpred | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDAKQKMGRVMQTAAFSLAEVSYA-TGENIGYQVQES-VSTARFKVRARQENVSGV--YLSQFES-Y----ID----PE----INDFRTGLGR---GGQQVQRAK-EIYSAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHV--IIPRTENTIAYINSELDEL- | |||||||||||||
6 | 2j69A | 0.08 | 0.06 | 0.78 | 0.60 | MRFsearch | ---AELRQVRTLARLACNHTREAVARRIPLLEQDVNELKKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLGNTFENDFLRYQPNLFDFLSSGKREAFNAALQKAFEQYITDKSAAWTLTAEKDINAAFKELSRSASQYGASYNQITDQITEKLTGIGIGGII----QADQARRELVKTAKKELVKHLPQVAHEQSQVVY-------------------------------------------------------------------NAVKECFDSYERE-----VSKRINDDIVSRKSELDNLVKQKQTREINRESEFNRLKNLQEDVIAQLQKIEAAY | |||||||||||||
7 | 4dylA | 0.10 | 0.09 | 0.86 | 0.98 | FFAS-3D | -SPQGHGVLQQGMRKWMAQ-RVKSDREYAGLLHHMSPDSPISQSWAEITSQTEGLSRLLRQHAEDLNSGPLSKLSLLIRER-QQLRKTYSEQWQQL---------QQELTKTHSQDIEKLKSQYRALARDSAQAKRKKAKDKYVRSLWKLFAHHNRYVLGVRAAHQHHHQLLLPGLLRS---LQDLHEEMACILKEILQEYLEVAIHREMAAA------------------------AARIQPEAEYQGFLRQYGSAPDVP--PCVTFDESLLEPGELQLNELTVESVQHTLTS------VTDELAVATEMVFRRQEMVTQLQQELRNEEENTHERVQLLGKRQVLQEALQGL- | |||||||||||||
8 | 7jh5A | 0.14 | 0.10 | 0.73 | 0.69 | SPARKS-K | EASTKLQRLNIRLAEALLEAIARLQELNLELVYLAVELTDP-KRIRDEIKEVKDKSKEIIRRAEKEIDDAAKESEKILEEAREAISELAKLLLKAIAETQDNLRAAKAFLEAAAKLQELNIRAVELLIREALEHAKRRSKEIIDEAERAIRAAKRESERIIEEARRLIE---------KGSELARELLRAHAQLQRLNLELLRELLRALAQLQELDLLRLASELT---------------------------------------------------------------------------------DPDEARKAIARVKRESNAYYADAERLIREAAASEKISREAERLI---- | |||||||||||||
9 | 1gaxA | 0.09 | 0.07 | 0.83 | 0.74 | CNFpred | ---------VIDPLEMVERYGADALRFALIYLATGG----DIRLDLRWLEMARNFANKLYNAARFVLLSR-TLADRFMRSRLSRGVEEITALYEA-------LDLAQAAREVYELVWSEFCDWYLEAAKPALKAGNAHTLRTLEEVLAVLLKLLPMMPFLTSELYQALTGKE-AWPEP---GGRDEEAERAFEALKQAVTAVRALKAEAGLPPQEVRVYLEGETAPVEENLEVFRFLSRADLLPERPA-----------KALVKAMPRVTARMPLEGLLDVEEWRRRQE--------------------KRLKELLALAERSQRKLASP----EVVEAEEARLKENLEQAERIR | |||||||||||||
10 | 4f4cA | 0.03 | 0.02 | 0.71 | 0.83 | DEthreader | -SFSLAEDVLKTAIKTVEYMFAIRETLRYAKAGKVVETVGLRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVLNFGDMLTFAAFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQIFNASGKISTRLATDVPN-LRTAI---------DFRFSTVITTLV-SM--G-------------MALIIILPIVAFGVLLLNCAYGL-LIPPTMQPRVLRVMYA---ITISTSTLG----------------------------------------FA--TSYFPEYAKA--A----------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |