>PF06149 (216 residues) MWVLIGIPIVVLGFALRFNPLLVVTIAGISTGLAGGMQTVEIISAFGKAFTDNRYMGLIW LTLPVIALLERNGLKEQAKHLISKIHVATTGRILMLYFFLRQMTAALGLNSLGGHAQMVR PLIAPMAEAAATTKYGDLPNDVRQKIRAHSAAADNVAVFFGEDIFIAVQSILLIKGFLDQ YGIDVEPLHLSVWAIPTAIAALIIHFIRLWLLDRSL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MWVLIGIPIVVLGFALRFNPLLVVTIAGISTGLAGGMQTVEIISAFGKAFTDNRYMGLIWLTLPVIALLERNGLKEQAKHLISKIHVATTGRILMLYFFLRQMTAALGLNSLGGHAQMVRPLIAPMAEAAATTKYGDLPNDVRQKIRAHSAAADNVAVFFGEDIFIAVQSILLIKGFLDQYGIDVEPLHLSVWAIPTAIAALIIHFIRLWLLDRSL | |||||||||||||||||||
1 | 6wtwA | 0.11 | 0.09 | 0.88 | 1.00 | DEthreader | GLGNRVAVMAILELMMGPSNSARTGGVWPVESPEMGVLSMDALHEGAWNILI-WLSILIFMAGKLISYGF--IAW-FAKFIQSEVHGINWGLVLVVLILLMFYTHYFFASGTAHM-TALYLPFLTVATAMG-----------A--PLGLSAMLLAFTGVINASTANPASILATTG--Y------VKQSEWWKMNFILGLIYMVIFGIVGTIMK-GW | |||||||||||||
2 | 6wtwA | 0.16 | 0.15 | 0.95 | 1.39 | HHsearch | AWEMFAIFVATVGCITPLPIGGTTLLGMVVTVLVGLAPVKGILSSFG-----NSAAWLIAMAFIMAHGISKTGLGNRVAYVMIEKFGKRSIGIGYAITGLELMMGALIPSNS-ART---GGVTWPVVESISKSYDSKPNDPSRKKIAYLDF-MAFHAILSTALFITGAAPNLVAQQMAAQKGYQMSWVSWFWAALVPVLVATVIIPLVIYKMYPPE | |||||||||||||
3 | 6okzC | 0.12 | 0.10 | 0.88 | 1.00 | DEthreader | VLGISMLAFIAVLWLTE---VTVTAILVPVMAVFGIFETQAALNNF-ANSIIFLFLGGFALAAAMHHQGL---DKVIADKVLAMAQGKMS-VAVFMLFGVTALLS-MWISNTATAA-MMLPLVLGVLSK--V-----DADKQ-RSTYVFVLLGVAYSASIGGIASPPNAIAAAEVG--------LSFTDWMKFGLPTAMMMLPMAIAILYFLLKPT | |||||||||||||
4 | 4r0cA | 0.13 | 0.10 | 0.76 | 0.83 | DEthreader | ------------LDADGLRYLFTTL-----------------------AGYLVLMFFAAQFVAWFNYSQLGLLLAVKGAAWLGAL-TVPKVVLLLLFVVLTALINLMIGSAKWSILAPVFIPMLMLLGI----------------SPEASQAAYRVGDSSTNIITPLMPYFVLVLGFARRYQPETGIGTLIALMLPYSLTLLLGWSVLLGVWIGFG | |||||||||||||
5 | 4r0cA | 0.18 | 0.16 | 0.89 | 0.49 | HHpred | ---LAGLALLVLPNPLRHSGLLIAGICGAVYGRVSGRNSGAVITAMEVTMASMAGYLVMFFAAQFVAWFNYSQLGLLLAVGAAWLGALKVVLLLLFVVL----TALINLMSASAKWSILAPVFIPMLMLL------GISPEASQAAYRVGDSSTNI-------ITPLMPYFVLVLGFARRYQPETGIGTLIALMLPYSLTLLLGWSVLLGVWI--- | |||||||||||||
6 | 6wtwA | 0.11 | 0.11 | 0.98 | 0.99 | DisCoVER | KGFIWPLAVGIVLWLVQAWEMFAIFVATIVGCITKPLPIGGTTLLGMVVTVGLAGNSAAWLIAMAFIMAHGISKTGLGNRVAYVMIFGRSIGIGYAITGLELMMGALIPSNSARTGGVTWPVVESISKSYD---SK-PNDPSRKKIGAYLDFMAFHANILSTALFITGAPNLVAQQMAAQKGYQMSWVSWFWAALVPVLVATVIIPVIYPEVKET- | |||||||||||||
7 | 6wtwA | 0.15 | 0.15 | 0.96 | 0.48 | MRFsearch | -WEMFAIFVATIVGCITKPIGGTTLLGMVVTVLVGLAKGVVIQTGILSSF-GNSAAWLIAMAFIMAHGISKTGLGNRVAYVMIEKFGKRSIGIGYAITGLELMMGALIPS----NSARTGGVTWPVVESISKSYDSKPNDPSRKKIGAYLDFMAFHANILSTALFTGAAPNLVAQQMAAQKGYQMSWVSWFWAALVPVLVATVIIPLVIYKMY--- | |||||||||||||
8 | 6okzC | 0.10 | 0.09 | 0.90 | 0.95 | SPARKS-K | VLGISMLAFIAVLWLTALHVTVTAILVPVMAVFFGIFETQAALNNFANS-----IIFLFLGGFALAAAMHHQGL---DKVIADKVLAMAMSVAVFMLFGVTALLSMW----ISN--TATAAMMLPLVLGVLSKVDADKQRSTYVFVLLGVAYSASIGGI---ATLVGSPPNAIAAAEVG-----LSFTDWMKFGLPTAMMMLPMAIAILYFLLKPT | |||||||||||||
9 | 6wtwA | 0.11 | 0.11 | 0.97 | 0.76 | MAPalign | KGFIWPLAVGIVLWLITAWEMFAIFVATIVGCITKPLPIGGTTLLGMVVTVLSAAWLIAMAFIMAHGISKTGLGNRVAYVMIEKF-GKRSIGIGYAITGLELMMGALIPSNSART-GGVTWPVVESISKSSKPNDPSR---KK--IGAYLDFMAFHANILSTALFITGAPNLVAQQMAAQKGYQMSWVSWFWAALVPVLVATIIPLVIYKMYPPEV | |||||||||||||
10 | 6wtwA | 0.14 | 0.14 | 0.98 | 0.64 | CEthreader | EMFAIFVATIVGCITKPLPIGGTTLLGMVVTVLVGLAPVKDVVNTGILSSFGNSAAWLIAMAFIMAHGISKTGLGNRVAYVMIEKFGKRSIGIGYAITGLELMMGAL----IPSNSARTGGVTWPVVESISKSYDSKPNDPSRKKIGAYLDFMAFHANILSTALFIGAAPNLVAQQMAAQKGYQMSWVSWFWAALVPVLVATVIIPLVIYKMYPPE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |