Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | FGAFLNILIALELLENITAYLKKHVIHLELVVVTALIAVSRKIIIFDFKEYSSWHLMSLGVAILCLAA |
1 | 6a15A | 0.05 | 0.04 | 0.94 | 1.17 | DEthreader | | NSHARLRTLLKDVERHTLFVL-DSWDEKKFTFNLMAKHIMDLL-GVL--NLSEQILDLILSLLFAGHE |
2 | 4adzA | 0.12 | 0.12 | 0.97 | 1.17 | DEthreader | | -YHKQKAEHLKRLRRIEGQIRG-LVSSTKALQSFALQLLEEHLRHCDAAKEIDAKVEEATKAIGRLLR |
3 | 4hzuS | 0.07 | 0.06 | 0.84 | 0.72 | DisCoVER | | --------RMGLLVGGASGFGYPVWCLFSLVIHGTQGLVVGWL--LPRHHKGIRSMLLPLLVGSLVM- |
4 | 2rfcA1 | 0.08 | 0.07 | 0.96 | 1.17 | DEthreader | | PLPSKINDYKDFIEETSNDLIK-NIEYAVRLVNIISKILGSGI-NVLA-GSLTEKIKYIMLLIIGGNE |
5 | 3jbrE | 0.06 | 0.06 | 1.00 | 0.59 | CEthreader | | QKEYSISAAAISVFSLGFLIMGTIRPASMFYVFAGLCLFVSLEVMRQSVKRMISFACACAAFVLLFLG |
6 | 6h53A | 0.03 | 0.03 | 1.00 | 0.53 | EigenThreader | | KLFAGACVVWFFVLFDMLDGAMARERDATCDRISDGAVFCGLLWWIAFHMRDRPLVIATLICLVTSQV |
7 | 6h7wQ6 | 0.12 | 0.10 | 0.82 | 0.18 | HHpred | | METATSIELFVEILDRYVYYFDQRNESVTTKYLNGLIELIHSNL-AGNQQDSASVEA----------- |
8 | 4he8J | 0.15 | 0.15 | 0.99 | 0.43 | MRFsearch | | -SLLEGLALFLLLLSGVLVVTLRNAIHAALALILNFLVLAGVYVALDARFLGFIQVIVYAGAIVVLFL |
9 | 4he8J | 0.15 | 0.15 | 0.97 | 0.53 | FFAS-3D | | MSLLEGLALFLLLLSGVLVVTLRNAIHAALALILNFLVLAGVYVALDARFLGFIQVIVYAGAIVVL-- |
10 | 1mvoA | 0.09 | 0.09 | 1.00 | 0.67 | SPARKS-K | | NKKILVVDDEESIVTLLQYNLERSGYDVITAGEEALKKAETELIVLDVMKLDGIEVCKQLRQQKLMFP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|