Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MEAINVFLETASGRTRILYSADTCECPTQCRATARRAAASVLEELDKYIVVSESTFTLAVRDYDIFYYLCDRGRLSLAENEFYLFNHGLLFTDDAGEEPVTGVGFVITDSMHVHVKPREGIAVTVYSDNSRAY |
1 | 6rfgA | 0.40 | 0.37 | 0.93 | 5.29 | HHpred | | MELVNIFLETDAGRVKFAIKNTDDVCAS-------ELINKFVELLSEYIHIDQSEFYLVVKDKDIFYFKCDRGSISIVNNEFYVFDEPLLFVKD--FTNVTGVEFIVTETMPCRIIPKNNHAVISVVTNHKFY |
2 | 6rfgA | 0.40 | 0.37 | 0.93 | 2.17 | MRFsearch | | MELVNIFLETDAGRVKFAIKNTD-------DVCASELINKFVELLSEYIHIDQSEFYLVVKDKDIFYFKCDRGSISIVNNEFYVFDEPLLFVKD--FTNVTGVEFIVTETMPCRIIPKNNHAVISVVTNHKFY |
3 | 6rfgA | 0.40 | 0.38 | 0.93 | 2.79 | SPARKS-K | | MELVNIFLETDAGRVKFAIKNTDDVC-------ASELINKFVELLSEYIHIDQSEFYLVVKDKDIFYFKCDRGSISIVNNEFYVFDEPLLFVKD--FTNVTGVEFIVTETMPCRIIPKNNHAVISVVTNHKFY |
4 | 6rfgA | 0.40 | 0.38 | 0.93 | 2.15 | FFAS-3D | | MELVNIFLETDAGRVKFAIKNTDDVC-------ASELINKFVELLSEYIHIDQSEFYLVVKDKDIFYFKCDRGSISIVNNEFYVFDEPLLFVKDF--TNVTGVEFIVTETMPCRIIPKNNHAVISVVTNHKFY |
5 | 5uw3A2 | 0.06 | 0.05 | 0.94 | 1.00 | DEthreader | | -GYGM-R-FLLGGVFCLANIRWHKAGFRDKKQNVFDDFISAAEYLISGYTKARRVAIEGGSN-GGLLVAIPDFGCAEA----NCGVMPINVRPQNEETQYPATMILTADDVPHKLTMQHVLCIIARIQRATQE |
6 | 2p6pA | 0.09 | 0.08 | 0.86 | 0.83 | DEthreader | | --AAGTVVMALPAVATTPIRITTDEIPSAQARFTGRWFARMAASSLPRMDSRRPIVGGTM------SYVAPLLALHAR-Q-TWDAVDADGHPDAERPLRLPAPLFIDICPPLRPAN------AAPARMMGM-- |
7 | 5ex2A | 0.07 | 0.06 | 0.89 | 0.52 | DisCoVER | | IELAGTKFHVISFMAQGGDIAATLGRE--PDLEAV--DG-EFVFR---RDPKTKSQYTGFYNGFPIETRQDLAKRVES--WMPHCAGVVSMARTNDPNSGKDQFFLM---RDESRLDRKYSSWGRMAKPDIL- |
8 | 3fssA | 0.12 | 0.11 | 0.89 | 0.35 | MRFsearch | | --NIKASFLPVKPNLIYLFTY---------LDSNVTDFEKCVEYIRKQAILTGFKISNPFVKINSFHLQCHRGTLYFLDHIIFGFKKPILLLD---ASDIESITYSSILTFNASLVTKDGEKYEFSIDQTEYA |
9 | 1yypA2 | 0.18 | 0.14 | 0.78 | 0.59 | SPARKS-K | | -------RESENSAVHVDLD------------------FGVVADLLKWIG-PTGTVQILVHAPAIKFILTNGSELEFTSNNRVSFHGVINVQLKVTKLPC-TLRIVTEHDTLLYVASRNGFAVENFLTEEP-- |
10 | 6rfgA | 0.33 | 0.29 | 0.90 | 0.66 | MAPalign | | MELVNIFLETDAGRVKFAI-------KNTDDVCASELINKFVELLSEYIHIDQSEFYLVVKDKDIFYFKCDRGSISIV--NNEFYVFDEPLLFVKDFTNVTGVEFIVTETMPCRIIPKNNHAVISVVTN---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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