Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | QNNLNNVTSVGSRLLGGALGLVGGIPGLVMLGAGAWYTMYQKQEQARQSALEYAATIDQVRANLNKMTLPETADNSGKTKESLAAQNKLVDEQRQKVEGLKSAIAGYQQMLASPGPSINGYLINHLISQEDAVKSLAAAQDELSVEQSRLNELSKKSEEIQSALKAVESQRDFLIRQQSAAQNNMRHSLLMVNAEHSEFNRIMSIGNQILTNRLALVNSPMRIPAAPLSEKQQDFIQKSERDKELSALTGEARVIRQAEFAADDIGLLNKPEFADNRQKYIDNQVAAYRNQEKL |
1 | 2tmaA | 0.09 | 0.08 | 0.88 | 1.31 | FFAS-3D | | KLDKENALDRAEQAEADKKAA------------------EDRSKQLEDELVSLQKKLKGTEDELDKYSEADAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLAT----ALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQ---------AEKYSQKEDKYEEEIKVDKLKEAETRAEFAERSVTKL----EKSIDDLEDELYAQKLKYKAISEEL |
2 | 6yvuA | 0.08 | 0.08 | 1.00 | 1.01 | SPARKS-K | | SRESLLVDIQKYNQIQKQIETIQADLNHVTEELQTQYATSQKTKTIQSDLNLSLHKLDLAKRNLDANPSSQIIARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKDMKEYDSSKLKELEEQESESERKYDLFQNLELETEQLSSELDSNKTLLHNHLKSIESLKLENSDLEGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKSSELQKLVHDLNKYKSNTNNMEKIIEDLDTYRERSKQLNEKFQELRKKVENVEKKEAALKTMIKTIEKDKMKI |
3 | 6ek7A | 0.09 | 0.07 | 0.78 | 0.67 | DisCoVER | | VQAVLQQSLDLDIAAKNIRVKTLLGDITDDMKGDINRHQTTTENVRKKVSDYRITLTNGLEPQVKTK-YDLMEKSN--MRKSIKELDEKIKEKRQRIEQLKKDYDKFVGLS--FTGAIGGIIAMAITGG-IFGAKAENARKEKNALISEVAELESKVSSQRALQTALEALSLSFSDIGIRMVDAESALNHLDFMWLSVLNQITESQIQFAMIN--NA-LRLTFV------NKFQQVITPWQSVG-------------------------------------------------- |
4 | 4ui9I | 0.08 | 0.06 | 0.68 | 0.83 | DEthreader | | PKYSNTSKIFSSDIIKLLGDVRLNILVLYAGMFK--S--LQYINLSLTCMCEAWEEILMQMDRLLLGLKKLGQSIESSYSSIQKLVIHLQSGSESLLYHLSELKGMAS-WK--Q------------KYEPLGLD-AAGIEEAITAVGSFILKANELLQVIDSSMKNFKAFFRWYVK--------------------------------------------------------LFKFPFLDAQVTVVLVFEKHWR-AGNG--F--------------RKVSCRVFEMDIDDEWEL |
5 | 6z9lA4 | 0.11 | 0.07 | 0.69 | 0.48 | CEthreader | | ---------------------AEAEKVKAEKEQAAKEAELANKQKEEAKAKDQKTKDDQAVADQQTV-VTTSQEKVTDAKADTAAKQADLTAKENALKDKQAATKQAQNTLDNSKEELKGHKGSMKSEIASNQEKLATAQQAESDAQQARSASQQALNTAKTTQATAEKELSVHKATLANLQAVATKSTTNYEEKVRQTATAEKSLQQTKDQLATINELIQNRA---------------------------------------------------------------------- |
6 | 5ic0A | 0.09 | 0.09 | 0.95 | 0.73 | EigenThreader | | PGQKECDNALRQLETVRELLEDMSYFGCLDS--------------VMENSKVLGEAMTGISQNAKNGNLPEFGDAIATASKALCGFTEAAAQAAYLVGVSDIVAKHTSALCNSCRLASARTKRQFVQSAKEVANSTANLVKGRAAMEPIVISAKTMLESAGGLIQTARALAVNRWSVLAGHSRTVSDSIKKLITSMRDKSCLRDLDQASLAAVSQQLAPREGISQEALHTQMLTAVQEISHLIEPLASAARAEKVSQMAQYFEPLTLAAVGAASKTAESALQLLYTAKEAGGNP |
7 | 6gy6A | 0.09 | 0.07 | 0.80 | 0.32 | HHpred | | --DLENAGKQITLTGDEIISVIDQMPIIEESMKKDIKRQQENTQKVKTAVSDFKLKLIGISSKKKLMDDNN-------LSTTIKDLQSKIDEKNKEIDQFQKDYNKYVGLAF-SGMV-GGIISWATGG--IFGDKAEKARKQKNKLIDEVKDLQSQVKDLQTSVQNLSLSFAGIHTS----MVDAEEALN---HLDFMWNTMLTQITTSRDKFDDI-NDALKL---------TSFVIAFKQ------------VIE--PWR----------DVQGSAAQLFDEALAEYKK---- |
8 | 6tpiA | 0.13 | 0.10 | 0.76 | 0.52 | MRFsearch | | --SIQAD----------------------------IAAKERAVRQKQQQRASLLAQLKKQEEAISEATLRETQNTLNQLNKQIDEMNASIAKLEQQKAAQERSLAAQLDAAFRQGEHTGIQLILSGEESQRGQRYFGYLNQARQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKKTLAGLESSIQQGQQQLSELRA------------NESRLRNSIARAEAAAKARAEREAREAQAVRDRQKEAT----------------------------- |
9 | 6z9lA | 0.13 | 0.11 | 0.84 | 1.29 | FFAS-3D | | QQEIASNQEKLATAQQAESD-----------AQQARSASQQALNTAKTTQATAEKELSVHKATLANLQAVKSTTNYEEKVRQTATAEKSLQQTKDQLATINELIQNRAAVL------------------EKAKTNVAEAQAIEQTSAKVLKEKQEAQKAEENTLNSLKEVLDLAKENLNQKQVALKTSTRSLSRLENAQPTYEKALNELNKAEAAV-------------VQAQEAYENSMKSLEEEQQAVATLAYAQAQEDLSNA-----KLELQQYQGVLRDLEAQQAEQRR- |
10 | 6yvuB | 0.09 | 0.09 | 0.99 | 0.99 | SPARKS-K | | VDKIERELSERENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVSKAQLNVVMKNLERLRGEYNDLQSETKTKKEKIKGLQDEIMKII--KLQMQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEMKNKLEKLNSLLTYIKSEISEIKDAETSCLS-EDELRELDVELIESKINELSYYVEE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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