>PF06098 (281 residues) YGNIMYDRRIVRGNTYAQHTLPASAQPDPIEIQRQQENKRRAMARKRAKEQLRPRSPEAV EGRKHIDVQTELYLEELSDRVEEADVDCQTDAFLDRPPSPLFIPAKTGKDVATQILEGDL FDFDIEVKPILEVLVGKTVEQALLEVMEEEELSNLRQQQRAFEELRNAELVEQQRLEEQE RRHREEKERRMKQQHEVLKKEKETAEKIAARAFAQSYLADLVPSVFGTLADNGYFYDPVE RDVEQGFMPWLMEQVEIQLEKSELGRMVLDGIIREVTSNRL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | YGNIMYDRRIVRGNTYAQHTLPASAQPDPIEIQRQQENKRRAMARKRAKEQLRPRSPEAVEGRKHIDVQTELYLEELSDRVEEADVDCQTDAFLDRPPSPLFIPAKTGKDVATQILEGDLFDFDIEVKPILEVLVGKTVEQALLEVMEEEELSNLRQQQRAFEELRNAELVEQQRLEEQERRHREEKERRMKQQHEVLKKEKETAEKIAARAFAQSYLADLVPSVFGTLADNGYFYDPVERDVEQGFMPWLMEQVEIQLEKSELGRMVLDGIIREVTSNRL | |||||||||||||||||||
1 | 7jtkE | 0.52 | 0.31 | 0.60 | 1.95 | FFAS-3D | -----------------------------------------------------------------------------------------------------------GTDAITQIENGDLFDFDFEVEPILEVLVGKVLEQGLMEVLEEEELAAMRAHQEHFEQIRNAELVATQRMEAAERRKLEEKERRMQQERERVERERVVRQKVAASAFARGYLSGIVNTVFDRL------VDPVMREVETAFMPWLKEQAIGYLARGVVARRVVDKLVEDAAAALA | |||||||||||||
2 | 7jtkE | 0.52 | 0.31 | 0.60 | 1.21 | SPARKS-K | -----------------------------------------------------------------------------------------------------------GTDAITQIENGDLFDFDFEVEPILEVLVGKVLEQGLMEVLEEEELAAMRAHQEHFEQIRNAELVATQRMEAAERRKLEEKERRMQQERERVERERVVRQKVAASAFARGYLSGIVNTVFDRLVD------PVMREVETAFMPWLKEQAIGYLARGVVARRVVDKLVEDAAAALA | |||||||||||||
3 | 3k5bA | 0.05 | 0.01 | 0.20 | 0.72 | DisCoVER | PVRLALEALLPGAKALVANEDLPHLEA-----------------------------------------ARERG---------------------------VELQAEPRLGVRA------------------------VG-AETQVENSL------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
4 | 6lz1A | 0.04 | 0.03 | 0.64 | 0.67 | DEthreader | -------------------VPLQFILPDSWKTTED-TF--YI-EM--ACN--G-IDTAWL----VCSQLQYLWLGSWVHFLLTCHMLNDQA-------------------GGPTPEMLEKLRKALPNVKLGNTVDE--------------------------------FSKDYSYPK-ESLQDLWRDTLLCQFHDLPGSCWQAWD-TE--VFSLEKY--EVLDKGVIIMACVFLKVEF-PVDIHETHYSDVAKFEVCHKYGFSTHGNLMR----------- | |||||||||||||
5 | 4wijA | 0.07 | 0.07 | 0.95 | 0.54 | CEthreader | KYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRFATHAARNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTT--PRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQM------------ | |||||||||||||
6 | 3o0yA | 0.11 | 0.11 | 0.99 | 0.73 | EigenThreader | RALSATMYGLSQKDIGQVISSDMEFY--SAGITTKNNQQVMAGLTRYFAGEPNFNFIVNQINGPLIDIPRVMQNDQPITTEKEALDYIVRLGQNWLPSSGSAEQHPFVNVFREKIEKVDSLTTEQKQSLITQVIAKVSQVVYPAYQSVEKASEQLLHQIGLDEVARISGVMNEILLAQGERMVALNEAGREELLSDINGYITEVTAKMFGLKTLTYHEANPALYSEQVAYELGMYEDPFGDLGRLQAELFRAVRLVVDTGLHDLGYKLGMLKILSLREQAK | |||||||||||||
7 | 6gmhQ | 0.18 | 0.12 | 0.70 | 0.48 | HHpred | ----------TQSDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRKQVNAQVREATAD----ISDVWLNLAHIYVEQKQSAVMYEN-CLRKFYKHQNTEVLFQECKQTLLKARHVAPSDVLMFNVALKEVLNAVKELELAHRYFSYLQCSDL--LSQAQYHVARARKQDEEE------RELRAKQEQEKLLKEQEEKRLQKKLLEQRAQYVEKTKNILM-------------------------------------------------------------- | |||||||||||||
8 | 6tpiA | 0.13 | 0.08 | 0.64 | 0.50 | MRFsearch | ------------------------------SIQADIAAKERAVRQKQQQRA----------------------------------------------------------------------SLLAQLKKQEEAISEATRKLRETQNTLNQLNKQIDEMNASIAKLEQQKAAQERSLAAQGQRLQAYFGYLNQARQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKKTLLESSIQQGQQQLSELRANESRLRNSIARAEAAAK | |||||||||||||
9 | 5araT | 0.08 | 0.05 | 0.59 | 0.94 | FFAS-3D | -------------------------------------------------------------------------------------------------------PYVLGTGLILYLLSKEIYVITPETFSAISVYIVKKYGASVGEFADKL-NEQKIAQLEEVKQASIKQIQDAIDMEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYRE-VKNRLDYHISVQNM-------MRQKEQEHMINWVEKRVVQSISAQQE-KETIAKCIADLKL--- | |||||||||||||
10 | 4uosA | 0.11 | 0.06 | 0.60 | 0.86 | SPARKS-K | --------------------------------------------------------------------------------------------------------------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLELKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGED-SEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVK | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |