Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | VCAETKVATNCLVKSENTHLTCKCSPNNTSSNTGNGSKCHAMCKCRITEPITMLGAYSAWGAGSFVATLIVLLVVFFVIYAREEEKNNTGTEVDQCLAYRSLTRKKLEQHAAKKQNIYERIPYRPSRQKDNSPLIEPTGTDDEEDEDDNV |
1 | 6v22E1 | 0.04 | 0.03 | 0.62 | 0.68 | DisCoVER | | ANCTVLSVQ-Q------IGEVFECTFTGADCRGTSQYPCVQVYVNNSESSRALLHSDEHQLLTNPKC-SYIPVQQYWKDEIG---------SQPFTC---------------------------YFNQHQRPDDVLL------------- |
2 | 4av3A | 0.07 | 0.06 | 0.83 | 0.83 | DEthreader | | --YGGLGGLLLVAVSG--ALGC---DVA-G-GAD--LESFVGA---------I-SSIILAILISYPIFFALVGLGCSMLGILYVIVKKPSRELNSLWTSALLTVVLTAFLTYFYLKAISPWFSIGSGITTLGVALAALAVVGPSD----- |
3 | 1vt4I3 | 0.05 | 0.05 | 1.00 | 0.59 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 3ke6A | 0.03 | 0.03 | 1.00 | 0.55 | EigenThreader | | EDTAAGGDWFDALALGDRLVLVVGDVVGHGKQVPGSKSATMCVGSLDFTSGYCTAGHAGPLGSGTGFPVEASTAEFADLAASIASARPIDRLCSDTLELLLRSTSDIADIVHAISEFVENAVEHGYATDVSKGGDGGQWGLAMAEALVSE |
5 | 6bd4A1 | 0.11 | 0.08 | 0.71 | 0.30 | HHpred | | -----------------------CHSVGTNSDVKRSLNCVLKCGYDYSRSEFTDIWMAVWASLCFISTAFTVLT-FLID--SSRFSYPERPIIFLSMCYNIYSIAYIVRLTVGRERIS-------CDFEEAAEPVLIQEG---------- |
6 | 7jg5b | 0.27 | 0.09 | 0.34 | 0.38 | MRFsearch | | -------------------------------------------------------------NGTFFAVLIIFLIVLGVISK---------WVVPPISKVLAEREAMLAKTAADNRKSAEQV----------------------------- |
7 | 6z16G | 0.15 | 0.07 | 0.50 | 0.40 | FFAS-3D | | -------------------------------------------------------VYTRSHAISKSTTLGIMCILLGAFLHFFIENNHFNSRLLLGIVFIFMT-SPVAAHLISRAAYYANVERWEGTVRDD------------------- |
8 | 4wsbC1 | 0.13 | 0.11 | 0.85 | 0.81 | SPARKS-K | | QRTEKAVLLTMTIFEGYEEFNVSGKR------------ASAVLKKGAQR---LIQAIIGGRTLEDILNLMITLMVFKMLKAVRGDVNRANQRLNPMYQLLRHFQK-------DSSTLLKNWGTEEIDPIMGIAGIMPDGTINKTQTLMGV |
9 | 5x3vA | 0.14 | 0.07 | 0.48 | 0.49 | CNFpred | | --------------------------------------------------GLRLGAPALTS-EDDFRRVVDFIDEGVNIGLEVKSKTAKLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPM--------------------------- |
10 | 6rlbA | 0.07 | 0.06 | 0.83 | 1.00 | DEthreader | | AHFYNSIDQQMI--------SQRMLALAFEQIIILQAAERLENRLRHTTCEKVVMNID--LLRQ-QQRWKDGLQELRTGLATVEAQGFQASDMAWKQHWNHQLYKALEHQYQMGLEALTISKAELFRLS-VLAVKVD------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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