Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MVHDRIAEELEAKGFYRRAAARWGEVMLLVETDKERHQVTMRRLECSRKAQRPPEPPDNYGDLRKAVDRTYAEMGIDGVSDEIWRNYPD |
1 | 5a0uA1 | 0.06 | 0.06 | 0.90 | 1.00 | DEthreader | | --------VLLFTKGMNGIKADAEAHLASLSDIDRIYYYKAAIETCEGVVNARAAEVNKTLQEALQSIWTVESLETGLSSIYMVEVAA- |
2 | 5u1sA | 0.05 | 0.04 | 0.94 | 1.00 | DEthreader | | YIVLLNIKIFNESADCRKAQNLALSLLKKNKLSQSRLALLKSLSFSFFQLIIRIDMSTESIRVSAAQKDLMESNLP--RR-KRR--THL |
3 | 5ctqA | 0.10 | 0.06 | 0.57 | 0.57 | DisCoVER | | YAWLEYYNLERAHGDTQHCRKALHRAVQCT--SDYPEHVCEVLLTMERTEGSL------------------------------------ |
4 | 5a0uA | 0.06 | 0.06 | 0.90 | 1.00 | DEthreader | | --------VLLFTKGMNGIKADAEAHLASLSDIDRIYYYKAAIETCEGVVNARAAEVNKTLQEALQSIWTVESLETGLSSIYMVEVAA- |
5 | 4ui9X | 0.12 | 0.11 | 0.97 | 0.43 | CEthreader | | EPWVVSGCHSFYSKRYSRALYLGAKAIQLN---SNSVQALLLKGAALRNMGRVIRLAPCRLDCYEGLIECYLASNSIREAMVMANNVYK |
6 | 4ri8A2 | 0.09 | 0.09 | 1.00 | 0.65 | EigenThreader | | THMLSDISSAMANGNWEEAKELAQCAKRDWTVGWIYTRILSRFVEILQRLHMKSVVEELALAHYRRSSTFSTLYGLLLWDIIFMDGIPD |
7 | 3eslB2 | 0.10 | 0.09 | 0.91 | 0.30 | HHpred | | LFYEEFSKLLENAQFFLEAKVLLELGAENNCRPYNR-LLRSLSNYEDRLREMNIVENQSVPDS-RE---RLKGRLIYRT-APFFIRK-- |
8 | 3qkyA | 0.17 | 0.13 | 0.80 | 0.28 | MRFsearch | | --QFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELQTDTRKAIEAFQLFIDR---------------- |
9 | 2v6xA | 0.17 | 0.11 | 0.65 | 0.67 | FFAS-3D | | ----QKAIDLDTATQYEEAYTAYYNGLDYEKNPKSKDLIRAKFTEYLNRA----------EQLKKHLESEEA----------------- |
10 | 5cwlA1 | 0.16 | 0.13 | 0.83 | 0.85 | SPARKS-K | | EKVARKAIEAAREGNVREQLQRALEIARESGTTEAVKLALEVVARVAIEAARRG-----NTDAVREALEVALEIARESG---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|