Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MDAANLSPSGRVLPLAATINGNVSVDENTGVMKPENGVSRNIRIVAGIALATTALAALGTGIAMACTTNASSQEFLGLGIATGVLGGVTALGGGLAMKYA |
1 | 5ztkA | 0.07 | 0.06 | 0.89 | 1.00 | DEthreader | | ILSCIVSINWMATIPCLLLQLLIV------LN-L---KGKELFSTATWLILAAWGMIITGYVGQLYEDDI-AQLMIWGAVSTAFFVVMNWIVGTKIFKNR |
2 | 3cfrA | 0.09 | 0.08 | 0.92 | 1.17 | DEthreader | | -VE--DKLAYLSY-EIK----LDMGSVFSPTWIISLTETKVFNQRKEHKGYMLAAQRNGEIIKEALHNPNLSDLSKSLNEMLFRAQRTEVAGMTAQINRA |
3 | 2looA | 0.07 | 0.03 | 0.45 | 0.65 | DisCoVER | | ---RRG-GVPSLIAGLFVGDVSLTAF--LAMGVRSKKIMPAG-LV----------------------------------------------AG-LSLMM- |
4 | 1xioA | 0.11 | 0.10 | 0.87 | 1.00 | DEthreader | | LVAMFIWSDWMVTTPLLLLSLSWT------AMQ-F-IKK-D-WTLIGFLMSTQIVVITSGLIADLS-ERD--WVYLWYICGVCAFLIILWGIWPLRAKTR |
5 | 5aymA | 0.10 | 0.10 | 1.00 | 0.56 | CEthreader | | LWLSVLSPHGVLLAAYLKDEMRLPETEIGLFRGLGAPYLVRRLGLISSSRWHLGFQGVTLGIAVTAFAMGSTASVYVFLGCILLSRVGLYGFSNGEFELR |
6 | 5c21A | 0.03 | 0.03 | 0.92 | 0.73 | EigenThreader | | EVLRLTSLIKEQFSTWQNQKYQKE--------LNLDKKRAERLTILARINRYENLSRVEKSRLDDFRQAIAKHAVLEQENKYVEAANELRVYKSQLEQIE |
7 | 3wxxB | 0.20 | 0.12 | 0.60 | 0.31 | HHpred | | -------------------------------------AIAS--VIGAILIATGVGAAVGA-IVGGAVGVAQETKVIAAEILVAIVSIAVTFGASAASKAV |
8 | 5tsaA | 0.18 | 0.11 | 0.60 | 0.42 | MRFsearch | | ----------------------------------------PIGRAVLVAVASGLMEPLGALVGVGISSGFALAYPISMGLAAGAMITVGLMAGFALMMFL |
9 | 6s7tH | 0.12 | 0.11 | 0.90 | 0.45 | FFAS-3D | | ----------ALCFVLAMTSGQNHIRGPPYAHYIHGSSQAQFVAETHIVLLFNGGVTLGMVLLCEAATSDMDIGKRKIMCVAGVVLFFSWMLSIFRSKYH |
10 | 5dooA2 | 0.10 | 0.09 | 0.93 | 0.71 | SPARKS-K | | -EFDNLKD----FYTTFNIRPISPEENISFYYENLPEPFISTTIMKAILYVYAELEQVAKEAFKKLGKYRLQDFLATLEQHFITLIFQGYLKIFETKP-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|