>PF06045 (219 residues) ANVNKSSTYKLRVALASATFSELQVIMDNGIVRVNLSNPEGIVTGIQYNGLDNLLEVLNE ESNRGYWDIVWDQGGEKRTEKGKKGKGTLDRLEATNFTVIVKNEEQVELSFTRTWNSSLE GKFAPLNIDKRFIMLAGSSGFYTYAIYEHLKEWPAFDLDNTRIAFKLRKDKFCYMAVADN RQRFMPLPDDRLPPRGEVLAYPEAVRLVDPLEPEFKGEV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | ANVNKSSTYKLRVALASATFSELQVIMDNGIVRVNLSNPEGIVTGIQYNGLDNLLEVLNEESNRGYWDIVWDQGGEKRTEKGKKGKGTLDRLEATNFTVIVKNEEQVELSFTRTWNSSLEGKFAPLNIDKRFIMLAGSSGFYTYAIYEHLKEWPAFDLDNTRIAFKLRKDKFCYMAVADNRQRFMPLPDDRLPPRGEVLAYPEAVRLVDPLEPEFKGEV | |||||||||||||||||||
1 | 3imhA | 0.08 | 0.07 | 0.81 | 1.00 | DEthreader | --------------SLKTNFVKCEITLENDGMAVKVLNYGATLEKVLLDGENMILSLNYERNFLGGTVGRIA----RVRAGQHQLNHIHGGTHVWDFRPS-CDSEHARVDLTLFDPDGNNDYPGNLKLHARYELDNE-NNLHYLLEAVS---DKLTIF-NPVNHTYFNLERALNLQMN---RKTKRIGDALNSDDILDHPLVLYA-------------- | |||||||||||||
2 | 1z45A | 0.08 | 0.07 | 0.87 | 1.00 | DEthreader | AGASG-WKTENPF-LRGVEARFRFVTIAGTRFQATFANLGASIVDLKVNGQSVVLGYGYNSAYIGATIGRYIFSLYQL--NGVNANHSSGSFKFLGPIIQNPSKDVFTAEYMLIDNEDTE-FPGDLLVTIQYTVNVAQKSLEIVYKGKLT--AGEATP-INLTNHSYFNLNTIMVR------TF-PTVLGPKNP-QFDCCF-YQFYT------------ | |||||||||||||
3 | 1nkgA1 | 0.12 | 0.08 | 0.66 | 2.36 | HHpred | --------------AFGITTSSSAYVIDTNQLKFTVSRSSCDITSIIHYG-TELQYSS---QGSHIG----S--G----------------LGSATVTAT-QSGDYIKVTCVTD------------TLTQYMVVHNGDPIIHMATYIT-----AEPSIGELRFIARLNSDLLPNEEP-------FGDVSTTAD--GTAIEGSDVFLV-GS-------ET | |||||||||||||
4 | 1nkgA1 | 0.09 | 0.06 | 0.68 | 0.77 | DisCoVER | --------------AFGITTSSSAYVIDTNALKFTVSRSSCDITSIIHY-GTELQYS-----QGSHIGS---------------------GLGSATVTATQS-GDYIKVTCVT------------DTLTQYMVVHNGDPIIHMATYITAE-----PSIGELRFIARLNSAHRVCMILNQYESSNSYNA-LY------WYMGPYSMYF--SRSGTPTIT- | |||||||||||||
5 | 1nkgA1 | 0.10 | 0.06 | 0.63 | 0.65 | MRFsearch | ----------------GITTSSSAYVIDTNQLKFTVSRSSCDITSIIHYGTELQYSS----QGSHIGSG----------------------LGSATVTATQS-GDYIKVTCVTD------------TLTQYMVVHNGDPIIHMATYITA-----EPSIGELRFIARLNSDLLPNEEP-------FGDVSTTA--DGTAIEGSDVFLV------------ | |||||||||||||
6 | 1nkgA | 0.09 | 0.07 | 0.74 | 1.06 | SPARKS-K | --------------AFGITTSSSAYVIDTNALKFTVSRSSCDITSIIHYGTELQ----YSSQG------SHIGSGLGS----------------ATVTATQSG-DYIKVTCVTD------------TLTQYMVVHNGDPIIHMATYIT---AEPS--IGELRFIARLNSDLLPNEEPFGDVSTTADGTAIEGSDVFLVGSETRSKFYSSERFIDDQRHC | |||||||||||||
7 | 5xq3A | 0.10 | 0.09 | 0.89 | 0.97 | MAPalign | ------------NSSIVVTDNSDALTVNTGEVAVSFPKGNVIIGDIKTKSGKVIGA-------NGRLVLQSQDSDNFDNRANSPIQYSNFDGNINEVFVN-QTSARTLVTVRGNHTVTDGTDHPWLPFVVRFYLYANSATIKV-HSIVFD--GENDFITGLGIRFDVPYYDRHIRAGVDGGIFNEAVQGPTWADYGLTQLTADGFGLKKRAGQSWVNIS | |||||||||||||
8 | 6lz1A2 | 0.06 | 0.06 | 0.97 | 0.75 | CEthreader | GKGILTAAHTSLKHPAAAYQKDDNFILVNDHLRVTIAPNGLILSLFDLHKEREILDLKSGKNHAGANQYVLFEDTPLSWDTEVFSLEKYEVLDKGKVSIKESGPLRASVVVDIPISE-------LSHMKATISLEGYNDCSEFTGVNFTCEVDWHESCKFLKVEFPVDIHSEFASYETQFGITKRPTHYNTSWDVAKFEVCHQKFADYSDFTYGVSVLN | |||||||||||||
9 | 1nkgA1 | 0.12 | 0.08 | 0.66 | 0.60 | MUSTER | --------------AFGITTSSSAYVIDTNQLKFTVSRSSCDITSIIHYGTELQ----YSSQGSHIG----------------------SGLGSATVTATQS-GDYIKVTCVTD------------TLTQYMVVHNGDPIIHMATYIT-----AEPSIGELRFIARLNSDLLPNEEP-------FGDVSTTAD--GTAIE-GSDVFL-------VGSET | |||||||||||||
10 | 1nkgA1 | 0.13 | 0.09 | 0.66 | 4.26 | HHsearch | --------------AFGITTSSSAYVIDTNQLKFTVSRSSCDITSIIHYG-TELQYSS---QGSHIGS------G----------------LGSATVTAT-QSGDYIKVTCVTD------------TLTQYMVVHNGDPIIHMATYIT-----AEPSIGELRFIARLNSDLLPNEEP-------FGDVSTTAD--GTAI-EGSDVFL-------VGSET | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |