Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120
| | | | | | |
| Seq | IKTELRPSYGLPLLQSGLYNTNQIFQKTQTLPPFIQDSNSTLPAPSTTNLPETNKLASHLQHRLSRSLLSANTTTPKTGGELRGLPTDDPWVVAGFVTLGVVAGGLVLILCYLYTPCCAYLVILCCWFKKWGPY |
1 | 2xn0A1 | 0.05 | 0.04 | 0.90 | 0.55 | DisCoVER | | KQISSHLYFLPKEYSHPATIVRNSVQVHNHGAVYLEKVASMQMDYVDKDFEV-QRENIGQGIKVFSSPFMALVGEAYGFALAKFEVERQIHVNTGINDY---------NF-KWKLNPEEF-QTP-EVLMVYSD- |
2 | 7r1rA | 0.04 | 0.04 | 0.89 | 0.83 | DEthreader | | PVALPALC-TL-SAFLAAIGV-NFYLHGKRYS-SANLTTFAQLKASNLAACPWFNETTYAKGILPIDTYKK-DLDTIANEPLHYWLRILRNSTL--SA---L--MPSETSSSNATGIEP-YLLVGIMQFGVK-- |
3 | 1l3aC | 0.06 | 0.06 | 0.98 | 0.66 | CEthreader | | ---TPKVFVGYSIYKGKVEPRSPEFSPLDSGAFKLSREMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGTKDSCEFFHDPNKGRSDEGRVRKVLKVEPLSGHFFNLSVQNKLINLDENIYIPVTKAEFAV |
4 | 3t9nA1 | 0.09 | 0.08 | 0.89 | 0.62 | EigenThreader | | IKAVKFLLDVLKILIIAFIGIKFADFLIYTKNAVRYIIYFLAGASILKIDMTSLLAVAGIGSLAIGFGAQNLVKDMISGF---FIIFEDQFSVGDYVTIN------GISGTVEEIGLRVTKIRGF------SDG |
5 | 2k5iA2 | 0.14 | 0.06 | 0.42 | 0.24 | HHpred | | ---NLGIESGKKVSGRR-YYIE---GREIDLGYGEATKIWVRRVSDAGEESHPQKLEHHHHHH----------------------------------------------------------------------- |
6 | 6wvgA | 0.15 | 0.08 | 0.53 | 0.78 | MRFsearch | | -----------------------------------------------------QKLNEYVAKGLTDSIHRYHPSDRKVEGCYAK-------ARLWFHSNFLYIGIITICVCVIEVLGMSFALTLNSQIDKT--- |
7 | 1mpxA2 | 0.11 | 0.07 | 0.67 | 0.34 | FFAS-3D | | ----ARTPLKVPTWLQGLWDQEDAIHSYAAEPRDKRNTLNYLVGPWRHEGDTARQFRHDVLRPFFDQYLVDGAPKADTPPVFIYNTGENHWDRL---------------------------------------- |
8 | 6xo4C | 0.10 | 0.10 | 0.96 | 0.72 | SPARKS-K | | YACVVGGRVFKPLHVEGRIDNEQLAAIKLKKASIYDLEYGDVPQCMKSDTLQYTSDKPPGFYNWHHGAVQYENNRGKGDSGRPILDNKG--RVVAIVLGGVNEGRTALSVVTWNQKGVTVKDTPEGSEPW---- |
9 | 6lbkA | 0.11 | 0.07 | 0.59 | 0.67 | CNFpred | | -----------------------------------------------------RHILTLVHKHFCTRLIERPQLIRAKVPIVKFRDK--VSCVEFALNVNNTVGIRNTFLLRTYAYLENRVRPLVLVIKKWASH |
10 | 6qd6A | 0.11 | 0.09 | 0.84 | 0.83 | DEthreader | | AIVSIAQKIVQETQLSANQPK-NITQPHNLNLNSPSTALAQLKAQSAEILKLANQVAQATLLALRSVLG------------G-YTK-SPGENNQK---FHYTDGTTI-N--CTLSLSIEQYEKIHEAYQILKLE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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