>PF06039 (486 residues) DVVLIGAGIMSATLGTLLKELQPELTIEIFERLDMAAAESSDAWNNAGTGHSAFCELNYT PQKQDGSVDIKKAVNIAEQFEVSRQFWAYLVENNIISNPQAFIQSIPHMSFVWGEENVDY LKKRYKALQQCHLFKKMEYSEDQEQLKAWMPLVMEGRDPNQKVAATHMEIGTDVNFGALS RALFNHLEQLDGVNIHFNHDVRDLKKADDGGWIIKVKDRETREKQTIKASFVFIGAGGGS LPLLEKSDIPEGKGFGGFPVSGQWLRCTNPDIIAQHQAKVYGKASVGAPPMSVPHLDTRM IDGERALLFGPYAGFSTKFLKNGSIFDLPKSIKVDNIHPMVSAGLDNIPLTKYLIAQVRQ KPEDRLEALREYYPEARMEDWKLEIAGQRVQVIKKDPEHGGILEFGTEVVSAADGSIAAL LGASPGASTAVSIMLNLLKRCFKDYVETEAWQRKLKQMIPSYGQSLLNNPQHCDELRDWT TSVLEL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | DVVLIGAGIMSATLGTLLKELQPELTIEIFERLDMAAAESSDAWNNAGTGHSAFCELNYTPQKQDGSVDIKKAVNIAEQFEVSRQFWAYLVENNIISNPQAFIQSIPHMSFVWGEENVDYLKKRYKALQQCHLFKKMEYSEDQEQLKAWMPLVMEGRDPNQKVAATHMEIGTDVNFGALSRALFNHLEQLDGVNIHFNHDVRDLKKADDGGWIIKVKDRETREKQTIKASFVFIGAGGGSLPLLEKSDIPEGKGFGGFPVSGQWLRCTNPDIIAQHQAKVYGKASVGAPPMSVPHLDTRMIDGERALLFGPYAGFSTKFLKNGSIFDLPKSIKVDNIHPMVSAGLDNIPLTKYLIAQVRQKPEDRLEALREYYPEARMEDWKLEIAGQRVQVIKKDPEHGGILEFGTEVVSAADGSIAALLGASPGASTAVSIMLNLLKRCFKDYVETEAWQRKLKQMIPSYGQSLLNNPQHCDELRDWTTSVLEL | |||||||||||||||||||
1 | 2qcuB | 0.12 | 0.09 | 0.78 | 1.17 | DEthreader | DLIVIGGGINGAGIAADAAGRG--LSVLMLEAQ-DLACATSS-ASSK-LIHGGL--RYLEH------YEFRLVSEALAEREVLLKMAP----------H--IAFPMRFRLPHRPHRPAWMIRIGLFMYDHLGKRLPGSTGLRFG--A---NSVL-KPE--IKRGFEYS--DCWVDDARLVLANAQMVVRKG-GEVLTRTRATSARRENGL-WIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDMHLPSP--YGIRLIKGSHIVVP-R-VHT-QKQ-AYILQN-EDK-RIV-FVIPWM---DEFSIIGTTDVEY--K---GDPKAVK--I-------------------------EESEINYLLNVYNTHFKKQLSDDIVWTYSGVRPLCDDESD---AITDYTLDIHDENKAPLLSVFGG-K-LTTYRKLAEHALEKLTPYYQGI-GPA-WTKESVL------------------AIEGDRDD | |||||||||||||
2 | 2qcuB | 0.12 | 0.09 | 0.78 | 1.17 | DEthreader | DLIVIGGGINGAGIAADAAGRG--LSVLMLEAQ-DLACATSSASS--K---LIHGGLRYLE-H----YEFRLVSEALAEREVLLKMAP--------H----IAFPMRFRLPHRPHLRPAMIRIGLFMYDHLGKRLPGSTG----LRFG-ANSVL--KP-EIKRGFE-YS-DCWVDDARLVLANAQMVVRK-GGEVLTRTRATSARREN-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDMHLPS-P-YGIRLIKGSHIVVPR--VHTQ-KQAYILQNEDK--R-IVFVIPWMD----EFSIIGTTDVEY--K-----GD-P--KAVKI-E-----------------E-SEI-NY--LLNVYNTHFKKQLSDDIVWTYSGVRPLCDDES---AITRDYTLDIHDENKAPLLSVFG--GKLTTYRKLAEHALEKLTPYYQGI--GPAWTKESV-------------------GAIEGDDD | |||||||||||||
3 | 4p9sA | 0.16 | 0.13 | 0.81 | 4.07 | HHpred | ETVIIGGGCVGVSLAYHLAKA--GMDVVLLEKSE-LTAGSTW--HAAGLTTYFH----PGIN---------LKKIHYDS----IKLYERLEETGQ----VVGFHQPGSIRLATTPERVDEFKYQMTRTNWHAT-E-QYII-EPEKIHELFPLLNM----DKILAGLYNPGDGHIDPYSLTMALATGARKY-GALLKYPAPVTSLKPRPDGTWDVET------PQGSVRANRIVNAAGFWAREVGKMIGL----DHPLIPVQHQYVITSTPEVKAKRELPVLRDLEGS-----Y-Y--LRQERDG--LLFGPYESQEASWVAHGVPPGFGKELFE-----------SDLD-----------RITEHVEAAMEMVPVLKKADIINIVNGPITYSPDILP------MVGPH---QGVRNYWVAIGGY-GIIHAGGVGTYLSDWILHGEPPFDLIELDPNRYGK-WT-TTQYTEAKARESYGFNNIV--- | |||||||||||||
4 | 4x9mA | 0.18 | 0.13 | 0.76 | 0.75 | DisCoVER | DVLIVGGGVIGCATAYELS-QY-KLKVTLVEKHHYLAQETSH--ANSGVIHTGI--DPN-P-----HKL--TAKYNILGKKLWNTYFKRL----GF-----PRQKIRTLIVAFNEMEREQLEVLKQRGI-ANQILDIQMLS-KEETLKLEPYVN--P---EIVAGLKIEGSWAIDPVLASKCLALAAQQN-KVQICTNTEVTNISKQVDGTYLVWT-NN--ETTPSFKVKKIIDAAGHYADYLAHLAKAD-D--FEQTTRRGQYVVVTN--QL-HLNSMVFMVPTI---HGKGVIVSPM-LD--GNFLVGPTALDG--V-------DKEATR-Y--I-----------------TKDA---PCMLTKIGKHMVPSLNINNALISFAGSRPIDKA-----TNDF-IIR-VAHNDPDFVILGGMKSPGLTAAPAIVREAVRLLL--TK-KPNW-----NG------------------------KYN- | |||||||||||||
5 | 4p9sA1 | 0.15 | 0.12 | 0.82 | 0.32 | MRFsearch | ETVIIGGGCVGVSLAYHLAKAG-MRDVVLLEKSELTAG---STWHAAGLTTY-------------FHPGINLKKIHYDSIKLYERLEEETGQ-------VVGFHQPGSIRLATTPERVDEFKYQMTRTNWHA--TEQYIIE-PEKIHELFPLLN----MDKILAGLYNPGDGHIDPYSLTMALATGARK-YGALLKYPAPVTSLKPRPDGTWDVETP------QGSVRANRIVNAAGFWAREVGKMIGLD----HPLIPVQHQYVITSTIPEVKALELPVLRDL-------EGSYYLRQER---DGLLFGPYESQEKMKLQASWVAHGVPP-----------------GFGKELFESDLDRITEHVEAAMEMVPVLKKADIINIVNGPITYSPD------ILPMVGPHQG---VRNYWVAIGFGYGIIHAGGVGTYLSDWILHGEPPFDLIELDPNRYGKW------TTTQYTEAKARESYGFN-- | |||||||||||||
6 | 4x9mA | 0.18 | 0.14 | 0.78 | 1.56 | SPARKS-K | DVLIVGGGVIGCATAYELSQY--KLKVTLVEKHHYLAQETSH--ANSGVIHTGID----------PNPHKLTAKYNILGKKLWLNYFKRL---------GFPRQKIRTLIVAFNEMEREQLEVLKQRGIANQINLEDIQMLSKEETLKLEPYV-----NPEIVAGLKIEGSWAIDPVLASKCLALAAQQN-KVQICTNTEVTNISKQVDGTYLVWTN---NETTPSFKVKKIIDAAGHYADYLAHLAKADD---FEQTTRRGQYVVVTNQGELH-LNSMVFMVPTIHGKGV----IVSPMLDGN--FLVGPT---------------ALDGVDKEATRY----ITKD-------------APCMLTKIGKHMVPSLNINNALISFAGSRPIDK----ATNDFI----IRVAHNDPDFVILGGMSPGLTAAPAIVREAVRLLNWKLTKKPNWNGKYNLPWI-------------------------- | |||||||||||||
7 | 3dmeA | 0.16 | 0.12 | 0.74 | 0.68 | MAPalign | DCIVIGAGVVGLAIARALAA--GGHEVLVAEAAEGIGTGTSS--RNSEVIHA-G--IYYPAD-------SLKARLCVRGKHLLYEYCAAR----GV-----PHQRLGKLIVATSDAEASQLDSIARRAGANGVD-DLQHID-GAAARRLEPALH-------CTAALVSPSTGIVDSHALMLAYQGDAESD-GAQLVFHTPLIAGRVRPEGGFELDFGGAE---PMTLSCRVLINAAGLHAPGLARRIEIPRDSIPPEYLCKGSYFTLAGRAP---FSRLIYPVPQ---HAGLGVHLTLD---LGGQAKFGPDTEWI-------------------------------ATEDYTLDPRR---ADVFYAAVRSYWPALPDGALAPGYTGIRPKISGP---HEPAADFAIAGPAHGVAGLVNLYGIEPGLTASLAIAEETLARL--------------------------------------------- | |||||||||||||
8 | 4x9mA | 0.16 | 0.13 | 0.78 | 0.57 | CEthreader | DVLIVGGGVIGCATAYELSQY--KLKVTLVEKHHYLAQETSH--ANSGVIHTGIDPNPHK----------LTAKYNILGKKLWLNTYFKRLG--------FPRQKIRTLIVAFNEMEREQLEVLKQRGIANQINLEDIQMLSKEETLKLEPYVNP-----EIVAGLKIEGSWAIDPVLASKCLALAAQQN-KVQICTNTEVTNISKQVDGTYLVWTNN---ETTPSFKVKKIIDAAGHYADYLAHLAKADD---FEQTTRRGQYVVVT--NQGELHLNSMVFMVPTIHGKGVIVSPML-----DGNFLVGPTALDGVDKEATRY--------------------------------ITKDAPCMLTKIGKHMVPSLNINNALISFAGSRPIDKATN-------DFIIRVAHNDPDFVILGGMKSPGLTAAPAIVREAVRLLNWKLTKKPNWNGKYNLPWI-------------------------- | |||||||||||||
9 | 3dmeA | 0.15 | 0.11 | 0.74 | 1.22 | MUSTER | DCIVIGAGVVGLAIARALAAG--GHEVLVAEAAEGIGTGTS--SRNSEVIHAGIY---YPADS----------LKARLCVRGKHLLYEYCAARGVP------HQRLGKLIVATSDAEASQLDSIARRAGANGV-DDLQHI-DGAAARRLEPAL-------HCTAALVSPSTGIVDSHALMLAYQGDAESD-GAQLVFHTPLIAGRVRPEGGFELDFG---GAEPMTLSCRVLINAAGLHAPGLARRIGIPRDSIPPEYLCKGSYFTLAGR---APFSRLIYPVPQHAGLGVHL----TLDLGGQ--AKFGPDTEWIATEDYTLD----------------------------------PRRADVFYAAVRSYWPALPDGALAPGYTGIRPKISGPHEPAAD-FAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLARLA-------------------------------------------- | |||||||||||||
10 | 4p9sA | 0.16 | 0.13 | 0.82 | 1.61 | HHsearch | ETVIIGGGCVGVSLAYHLAKA--GMDVVLLEKSE-LTAGSTW--HAAGLTTYFH------PGIN-------LKKIHYDSI----KLYERLEETGQ----VVGFHQPGSIRLATTPERVDEFKYQMTRTNWHAT-E-QYII-EPEKIHELFPLLNM----DKILAGLYNPGDGHIDPYSLTMALATGARKY-GALLKYPAPVTSLKPRPDGTWDVET------PQGSVRANRIVNAAGFWAREVGKMIGL----DHPLIPVQHQYVITSTPEVKAKRELPVLRDLEGS--Y----Y--LRQERDG--LLFGPYESQEASWVAHGVPPGFGKEL-----------FESDLD-----------RITEHVEAAMEMVPVLKKADIINIVNGPITYSPDILP------MVGPH---QGVRNYWVAIGGY-GIIHAGGVGTYLSDWILHGEPPFDLIELDPNRYGK-WT-TTQYTEAKARESYGFNNIVGYR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |