>PF06025 (385 residues) TRAVRVVDLITNLDMAAFQSHSGLSIFIYRLEHEVDLCRKECPFVIKPKIQRPSTAHEGE EMETDTDGVQCIPQRAALLKSMLNFLKKAIQDPAFSDGIRHVMDGSLPTSLKHIISNAEY YGPSLFLLATEVVTVFVFQEPSLLSSLQDNGLTDVMLHALLIKDVPATREVLGSLPNVFS ALCLNARGLQSFVQCQPFERLFKVLLSPDYLPAMRRRRSSDPLGDTASNLGSAVDELMRH QPTLKTDATTAIIKLLEEICNLGRDPKYICQKPSIQKADGTSTAPPQRANHAAEEASSED EEEEEVQAMQSFNPPAQSDTDSNQQVIRTEERVPIPLMDYILNVMKFVESILSNNTTDDH CQEFVNQKGLLPLVTILGLPNLPVD |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TRAVRVVDLITNLDMAAFQSHSGLSIFIYRLEHEVDLCRKECPFVIKPKIQRPSTAHEGEEMETDTDGVQCIPQRAALLKSMLNFLKKAIQDPAFSDGIRHVMDGSLPTSLKHIISNAEYYGPSLFLLATEVVTVFVFQEPSLLSSLQDNGLTDVMLHALLIKDVPATREVLGSLPNVFSALCLNARGLQSFVQCQPFERLFKVLLSPDYLPAMRRRRSSDPLGDTASNLGSAVDELMRHQPTLKTDATTAIIKLLEEICNLGRDPKYICQKPSIQKADGTSTAPPQRANHAAEEASSEDEEEEEVQAMQSFNPPAQSDTDSNQQVIRTEERVPIPLMDYILNVMKFVESILSNNTTDDHCQEFVNQKGLLPLVTILGLPNLPVD | |||||||||||||||||||
1 | 5yz0A | 0.06 | 0.04 | 0.69 | 1.00 | DEthreader | LFLFKSKSPAIFVLTKELLQLFEDLVYLHRRNVMGHAV---------------------------------EWPVVMSRFLSQLDEHMGY--------LQ-S-APLQLMSMQNLEFIEVTLLIIAIVFFRRQELLLWQIG-CVLLEYG--SPKIKSLAISFLTEFQGLQPASTFFSSFLELLKLVEMDTDQLKLYEPLSKLIKTLFPF-EAEAY----------RNIEPVYLNMLLEKLCVFEDGVLMRLKSDLLKAALCHLLQYFFVPAG-------------------------------------------------------------YESALQVRKVYVRNICKALLDVLGIEVDAEYLLGPLYAALKMESMEIEEIQEH | |||||||||||||
2 | 5dlqB | 0.06 | 0.05 | 0.74 | 1.00 | DEthreader | ESLTALLSEFSNCKRVFQE--EDLRQIFMLTVGVLQEFSRR-ENL-------------------S---AQMSSVFQRYLALANQVLSWN-FL--PPTESWREALLD-SRVMELFFTVHRKIMAQDSLQCLAQLASLHGPFEGSQVDYLA-HFIEGLLNTINGIEIEEAVGISSIISNLITVFPRVTAIPSLFSSFNCLTHLTCSFGRS-AALEEVLDKDDMVYMEAYDKLLESWLTLVR--KGFFTQHAVQVFNSYIQCHLAAPDGTRNL-T--------------------------------------------------------AN-GVASR-E---DRQFSDQLASVG-M----LGRIAAEHCMPLLTSLLERRMDLYIM | |||||||||||||
3 | 5z8hA | 0.10 | 0.07 | 0.68 | 0.48 | HHpred | CPAVCVLMKLSFEHRHAMNELGGLQAIAELLQVDCEMYGLT-----------------------------NDHYSITLRRYAGMALTNLTFGD---VANKALCSMGCMRALVAQLKSE---SEDLQQVIASVLRNLSWRADNSKKTLREVGSVKALMECALE---VKKESTLKSVLSALWNLSACTENKADICADGALAFLVGTLTYRSQTN----------TLAIIESGGGILRNVSSTNEDHRQILREN--NCLQTLLQHLK---------------------------------S-----------------------------HS--------LTIVSNACGTLWNLSARNP--KDQEALWDMGAVSMLKNLIHSKHKM-- | |||||||||||||
4 | 4hxtA | 0.09 | 0.05 | 0.58 | 0.71 | DisCoVER | STQKEAARDLAASAIKAIVDAGGVEVLVKLLT--S--------------------------------------TDSEVQKEAARALANIASG--PDEAIKAIVDAGGVEVLVKLL--TST-DSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLL----TSTDSEVQKEAARALANIASGPDAIKAIVDAGGVEVL-VK--LLT---S-----------TDS-EVQKEAARALAN---I---------------------ASGPTSAIKAIV---DAGGVEVLQKLLT----------STDSEVQKEAQRALENIK----------SGGWLE------------------------------------------------ | |||||||||||||
5 | 5xgcA | 0.12 | 0.08 | 0.66 | 0.25 | MRFsearch | --IFEVLAPLADAIKLQLVEAGLVECLLEIVQQKV---------------------------------DSDKEDDITELKTGSDLMVLLLL---GDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFAR-NDANCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSE--------------MPPVQFKLLGTLRMLIDAQAEAAEQLGVKLVERLVEWCEA------------------------------------------------------------------------KDHAGVMGESNRLLSALIRHSKSKDVIKTIVQSGGIKHLVTMAT------- | |||||||||||||
6 | 5xgcA | 0.11 | 0.08 | 0.69 | 0.90 | SPARKS-K | EMIFEVLAPLADAIKLQLVEAGLVECLLEIVQQKV-------------DSDK--------------------EDDITELKTGSDLMVLLL---LGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFA-RNDANCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFL--------------KSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKN-VKLVERLVEWCEAKDH---------------------------------------------------------------------AGVMGESNRLLSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQ | |||||||||||||
7 | 4k6jA | 0.08 | 0.06 | 0.84 | 0.76 | MAPalign | --ENQEFTDDI-EYLLSGLKSTQLNTRCLSVISLATKCGMVAMVFKTLDDSQHHQNLSLCTAALMYILMDLDRASLDLMIRLLETLLSLTSKRAGDWFKEELRLLGGLDHIVDKVKCVLVASLWGAERCLRVLESVTVHNPENQSYLIAYQLIVSSAKALQHCEELIVEDCMRAIIGVLLNLTDNEWGSTKTGEQGLIGTALNCVL-----QVPKYLPQEQ-RFDIRVLGLGLLINLVEYSARNRHCLVQALVQLFLERERAAQ--LAESK-------------------------------------------------TDELIKDNKALQHAGKHMEDCIVASYTALLLGCLCQEPINVTTVREYLPFSIMTEMLKKFLSFMN | |||||||||||||
8 | 4rv1A | 0.13 | 0.11 | 0.90 | 0.48 | CEthreader | ARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKADAGGVEVLVKLLTSTDSEVQKEAARALANIASGPD--EAIKAIVDAGGVEVLVKLLTSTD---SEVQKEAARALANIASGPTSAIKAIVDAGGVEVLVKLLT----STDSEVQKEAARALANIAGPDEAIKAIVDAGGVEVLVKLL--------------TSTDSEVQKEAARALANIASGPDEAIKAIVDA--GGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIV--------DAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKLLTSTDSEVQKEAQRALENIKSGGWL------ | |||||||||||||
9 | 4rxhB | 0.09 | 0.08 | 0.85 | 0.60 | MUSTER | FEAAWALTNIASTQTQVVIEAGAVPIFVELLGSPEPDVREQ---GDSPQCRDYVLSCGALRPLLTLLGDSRK---LSMLRNATWTLSNFCRGKTPQPD--WNTIAPALPVLAKLVYSLD---DEVLIDACWAISYLSDGSNDKIQAVIEAGIPRRLVELLMHA----STSVQTPALRSVGNIVGDDVQTQVIINCGALPCLLSLLSSNK--------------DGIRKEACWTISNITAGNSAQIQSVIDA---IIPPLIHLLSHADLKTRKEACW---SNATSGGLQKPDQIRYLVAQGCIKPLCDLLACPDNK-------------------QVALDGLENILKVGELDKNAASINRYALFIEECGGMEKIHDCQTNAN--EE | |||||||||||||
10 | 5xgcA | 0.11 | 0.10 | 0.87 | 0.78 | HHsearch | LQTGRALGNICYSLQAQLINMGVIPTLVKLLGIALTEMFGNLAE--LESSKEQFASTNIAEELVEHDAIKLQLVEAGLVECLLEIVQQKVDSLLGDESMQKLFEGSVFQRVLSWIPSN---NHQLQLAGALAIANFAR-NDANCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPP--------------VQFKLLGTLRMLIDAQAEAAEQLGKN-VKLVERLVEWCEAKDHAGVMGESNRLLSALI--RHSKSKDVIKTIVQSGGIKHLVTM-----------------ATSEH------VIMQNEALVALALIAALEL-GTAEKDLESAKLVQILHRL---PEIKYN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |