>PF05977 (521 residues) SPLAPFRHDIFRTIWIASLASNFGGLIQAVGAAWLMTSISQSVNMVALVQASTSLPIMLF SLVSGALADNFDRRRIMLVAQSFMLAVSALLTVCAYYGIVTPWLLLIFTFLLGCGTALNN PSWQASVGDMVPRDDLPAAVALNSMGFNLTRSVGPAIGGAIVAAAGAAAAFAANTLSYFA ILFALARWKPVAPENRLPRETLGRAVSAGLRYVAMSPNIRKVLVRGFAFGLSASAILALL PLVARDLVGGGPLTYGVMLGAFGVGAIGGALLSARLREFLTSEAIVRYAFAGFAFSALVT AISPQAWLTCLVLAVSGACWVLALSLFNTTVQLSTPRWVVGRALSLYQTMTFGGIAGGSW LWGVTAEQYGAANALIGSCLLMLAGAAIGLRFALPEFKSLNLDPLNRFNEPLLELDLKPR SGPIVVMIDYEIADEDIPEFLKTMAERRRIRIRDGAGHWALMRDLENPTTWTETYHVPTW VEYVRHNQRRTQADAAVGDKLTAFHRGPNPPRVHRMIERQT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SPLAPFRHDIFRTIWIASLASNFGGLIQAVGAAWLMTSISQSVNMVALVQASTSLPIMLFSLVSGALADNFDRRRIMLVAQSFMLAVSALLTVCAYYGIVTPWLLLIFTFLLGCGTALNNPSWQASVGDMVPRDDLPAAVALNSMGFNLTRSVGPAIGGAIVAAAGAAAAFAANTLSYFAILFALARWKPVAPENRLPRETLGRAVSAGLRYVAMSPNIRKVLVRGFAFGLSASAILALLPLVARDLVGGGPLTYGVMLGAFGVGAIGGALLSARLREFLTSEAIVRYAFAGFAFSALVTAISPQAWLTCLVLAVSGACWVLALSLFNTTVQLSTPRWVVGRALSLYQTMTFGGIAGGSWLWGVTAEQYGAANALIGSCLLMLAGAAIGLRFALPEFKSLNLDPLNRFNEPLLELDLKPRSGPIVVMIDYEIADEDIPEFLKTMAERRRIRIRDGAGHWALMRDLENPTTWTETYHVPTWVEYVRHNQRRTQADAAVGDKLTAFHRGPNPPRVHRMIERQT | |||||||||||||||||||
1 | 3wdoA | 0.15 | 0.13 | 0.86 | 0.23 | MRFsearch | ---TPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALS-----DSIWGIILGRALQGSGA--IAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRES--GMVKGSFSKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLADAG-FPAAEHWKVYLATMLIAFGSVVPFIIYAEVKKMKQVFVFCVGLIVVAEIVLWNATQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEP---------------------------PYVSSLRIEI----PADIAANEALKVRLLETEGVKEVLIAEE---EHSAYVKIDSK------------VTNRFEVEQAIRQAL---------------- | |||||||||||||
2 | 4gbyA | 0.11 | 0.09 | 0.78 | 1.17 | DEthreader | -YNSSYIFSITLVAT-LGGLLFGYDTAVISGTVESLNTVAEANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPEINPYLAVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSLGWRYMFASECIPALLFLMLLYTVPESPRWLMSRG----TGGRLLMFGVGVIVIGVMLSIFQQFV--GINVVLYYAPEVFKTLGAST-DIALLQTIIVGVINLTFTVLAIMTVKFKPLQIIGALGMAIGMFSLGTAFYQAPGIVALLSMLFYVAAFASWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELE-A--L--WE------------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 3wdoA | 0.14 | 0.12 | 0.86 | 2.94 | SPARKS-K | YKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALGASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALS-----DSIWGIILGRALQGSGAI--AAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPNSTHVLNESGMVK----GSFSKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLADA-GFPAAEHWKVYLATMLIAFGSVVPFIIYAEVRKMKQVFVFCVGLIVVAEIVLWNATQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTM---------------------------KEPPYVSSLRIEIPADIAAN-EALKVRLLET---EGVKEVLIAE---EEHSAYVKIDSKVTNR----------------FEVEQAIRQAL------------ | |||||||||||||
4 | 6t1zA | 0.12 | 0.09 | 0.74 | 3.90 | HHpred | -KEFWNLDKNLQLRLGIVFLGAFSYGTVFSSMTIYYNQYL-GSAITGILLALSAVATFVAGILAGFFADRNGRKPVMVFGTIIQLLGAALAIASNLPGHVNPWSTFIAFLLISFGYNFVITAGNAMIIDASNAENRKVVFMLDYWAQNLSVILGAALGAWLFRPAF-EALLVILLLTVLVSFFLTTFVMTETFKP---TD----NIFQAYKTVLQDKTYMIFMGANIATTFIIMQFDNFLPVHLSNSFKTIQRMLTIYLILACVLVVLLMTTLNRLTKDWSHQKGFIWGSLFMAIGMIFSFLTTTFTPIFIAGIVYTLGEIVYTPSVQTLGADLMNPEKIGSYNGVAAIKMPIASILAGLLVSPMIKAIGVSLVLALTEVLAIILVLVAVNRH--QKTK-------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 3wdoA | 0.14 | 0.12 | 0.86 | 0.43 | CEthreader | YKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALGASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALS-----DSIWGIILGRALQGSGA--IAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMV--KGSFSKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVVAEIVLWNATQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEP---------------------------PYVSSLRIEIPADIAAN-EALKVRLLET------EGVKEVLIAEEEHSAYVKIDSKVTNRFEVEQAIRQAL---------------------------- | |||||||||||||
6 | 6kkiA | 0.13 | 0.09 | 0.70 | 0.52 | DisCoVER | ----VAW-LRVVTLAVAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGIMLTIYAWVVALMSLPFMLMTSQVERRKLLICLFVVFIASHVLSF--LS---WSFTVLVISRIGVAFAHAIFWSITASLAIRMA-----AQALSLIATGTALAMVLGLPLGRIVGQYFGWRMTFFAIGIGALITLLCLIKL-L-P---------------SLPLLF-RRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLG-NQYASALVSTAIALLLVCLALLLAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPD-ATDVAMALFSGIFNIGIGAGALVGNQVSLHWSMSMIGYVGAVPAFAALIWSIII-FRRW--PVT----------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 3wdoA | 0.15 | 0.13 | 0.86 | 1.59 | MUSTER | YKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALGASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALS-----DSIWGIILGRALQGSGA--IAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRES--GMVKGSFSKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLADA--FPAAEHWKVYLATMLIAFGSVVPFIIYAEVRKMKQVFVFCVGLIVVAEIVLWNAQQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPPYV---------------------------SSLRIEIPADIAAN-EALKVRLLET---EGVKEVLIAEEEH---------SA-----YVKIDSKVTN-----RFEVEQAIRQAL------------ | |||||||||||||
8 | 6t1zA | 0.12 | 0.09 | 0.74 | 1.63 | HHsearch | GKEFWNLDKNLQLRLGIVFLGAFSYGTVFSSMTIYNQYLG--SAITGILLALSAVATFVAGILAGFFADRNGRKPVMVFGTIIQLLGAALAIASNLPGHVNPWSTFIAFLLISFGYNFVITAGNAMIIDASNAENRKVVFMLDYWAQNLSVILGAALGAWLFRPAFEA-LLVILLLTVLVSFFLTTFVMTETFKPT---D----NIFQAYKTVLQDKTYMIFMGANIATTFIIMQFDNFLPVHLSNSFKTIQRMLTIYLILACVLVVLLMTTLNRLTKDWSHQKGFIWGSLFMAIGMIFSFLTTTFTPIFIAGIVYTLGEIVYTPSVQTLGADLMNPEKIGSYNGVAAIKMPIASILAGLLVSPMIKAIGVSLVLALTEVLAIILVLVAVNR--HQKT--K------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
9 | 6w4sF | 0.10 | 0.08 | 0.74 | 2.72 | FFAS-3D | --LADYLTSAKFLLYLGHSLSTWGDRMWHFAVSVFLVELYGNLLLTAVYGLVVAGSVLVLGAIIGDWVDKNARLKVAQTSLVVQNVSVILCGIILMMVFLHLTSCYILIITIANIANLASTATAITIQRGEDRSKLANMNATIRRIDQLTNILAPMAVGQIMTFGSPVIGCGFISGWNLVSMCVEYVLLYQKTPALAVKAGPFRTFRDGWVSYYNQPVFLAGMGLAFLYMTVLGFDCITTGYAYT--QGLSGSILSILMGASAITGIMGTVAFTWLRRKCGLVRTGLISGLAQLSCLILCVISVSVSLLFAGVIAARIGLWSFDLTVTQLLQENVIESERGIINGVQNSMNYLLDLLHFIMVILAPNPEAFGLLVLISVSFVAMGHIMYFRF--------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 6h7dA | 0.11 | 0.08 | 0.77 | 1.17 | DEthreader | --VTAFVIMTCIVAAMGGLLFGYDLGISGGVTSMEFLTFVQKFDNLQLFTSSLYLAALVASFMASVITRKHGRKVSMFIGGLAFLIGALFNAFA--V-N-V-SMLIIGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILVANLINYGTSKMQGWRVSLGLAAVPAVVMVIGSFILPDTSMLERGVAK-VENPWKNIMESKYRP-ALIFCSAIPFFQQIGINVIMFYAPVLFKTLGFGD-DAALMSAVITGVVNMLSTFVSIYAVRYGRLFLEGGIQMFICQLLVGSFIGRLPADWILAFICVYVAGFASWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTML---CHMK-FGLFYFFASMVAIMTVFIYFLLPETKGVPIEEMGR-------KKYI----------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |