>PF05959 (188 residues) MNVNLYCPNGEHDNNISFIMPSKTNAVIVYLFKLDIEHPPTYNVNAKTRLVSGYENSRPI NINVRSITPSLNGTRGAYVISCIRAPRLYRDLFAYNKYTAPLGFVVTRTHAELQVWHILS VRKTFEAKSTRSVTGMLAHTDSGPDKFYAKDLIIMSGNVSVHFINNLQKCRAHHKDIDIF KHLCPELQ |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MNVNLYCPNGEHDNNISFIMPSKTNAVIVYLFKLDIEHPPTYNVNAKTRLVSGYENSRPININVRSITPSLNGTRGAYVISCIRAPRLYRDLFAYNKYTAPLGFVVTRTHAELQVWHILSVRKTFEAKSTRSVTGMLAHTDSGPDKFYAKDLIIMSGNVSVHFINNLQKCRAHHKDIDIFKHLCPELQ | |||||||||||||||||||
1 | 6ohgA | 0.08 | 0.05 | 0.63 | 0.68 | DisCoVER | DKYASQNTN----------------------KEYVCDFTDQLKPTEGPKVKKCEVKVNLIKVKIICPLKGSEKLYDNIEYVPVLTKLKEKLLSIYGLLISIEFTLPPVVHKATVFYFICDNSKTE-D-------------------------NKKGNRGI--V-------------EVY---VEP--- | |||||||||||||
2 | 2vtvA | 0.08 | 0.06 | 0.78 | 0.67 | DEthreader | SGFVCKGTQTQYGAISFMPGNVS---TPSVYFGVYIKTFKVKAYTVDIVAHSM------G-SMSATLYYNNWTVRKFINLGGIRGLYSCYYTGYANAAAP-TCGSQ-------------------------SYTFGFPGWYYGVWVSNPWNMM--YTLSAKDQVGCATQADYDWDGMPHFT-GAY--- | |||||||||||||
3 | 2bixA | 0.04 | 0.04 | 0.97 | 0.52 | CEthreader | PCYVTFSIKSSLSSTLTLLELDPQGKLLRQKTETFPGFAFIHDFAITPHYAIFLQNNVTLNGLPYLFGLRGAGECVQFHPDKPAQIILVIKRIPVQAGFVFHHANAFEENGKIILDSICYRSTNFDNLDPGQLWRFTIDPAAATVEKQLMVSRCCE-----FPVVHPQQVGRPYRYVYMGAAHHSTGN | |||||||||||||
4 | 6kxsA | 0.07 | 0.06 | 0.84 | 0.70 | EigenThreader | IRVFAIPPSTKSTKLTCLVLTTYDSVTAVGEASICEDDWNS--GERFTC-TVTHTDLPSPLKQTISLLPQLNLRESATITCLVTGFSPAD-----VFVPEKYVTSPEPQAPGRYFAHSILTVEEEWNTGETYTCVVAH----EALPNRVTERTVDK------------STGKPTLYN-------VSLV | |||||||||||||
5 | 2hgqE1 | 0.12 | 0.07 | 0.60 | 0.30 | HHpred | ----------------------GPCPVVQR----RTPE-----KDGYTAVQLGFLPQNPKRVNRPLKGHFKAGVEPVRILREIRDFN---------PEGDTVTV---EIFKPGERVDVTGTSKGRG-AERVTVMNLEVVDV-I----PEENLLLVKGAVPGP-------------------------- | |||||||||||||
6 | 6vbu7 | 0.13 | 0.10 | 0.80 | 0.75 | MRFsearch | --VNDKFTLNKDDASYSLILEVQTAIDNVLIQSDV-----------PIDLLDV-----DKNSAVVSFSSCDSESNDNFLLATYRCQAN----------TTRLELKIRSIEYGTLQAYVTPRI----QPKTCQVRQYHIKPLSLHQRDRPMNTLTLTGQFFSELHSWVVFCMPAGECVTFYFQN----- | |||||||||||||
7 | 2gpjA | 0.11 | 0.10 | 0.95 | 0.43 | FFAS-3D | AYIKLLFPQAGERPLRTYTIRQQRDDEIDVDFVLHDTDGP------ASSWAKTAQVGELIQIGGPGLKKLINFEADWFLLAGDTLPAI-SVNLAKLPNNAVGYAVIEVLSVHPEHVELHWVINPEADPEGRPLVERIAQLPWLAGEPA--VWIACEFNSRALRRHFKQAHALPKSHFYTSSYWKIGCN | |||||||||||||
8 | 3ffzA | 0.10 | 0.09 | 0.94 | 0.62 | SPARKS-K | TNKNQFGIYNDKLSEVNISQNDYINFSISFWVRIPNYDNKIVNVNNEYTIINCMRDNNKVSLNIIWTLQDNAGINQKLAFNY-----------GNANGIKWIFVTITNDRLGDSKLYINGLIDQKSILNLGNIHNILFKIVNCSYYIGIRYFNIFDKELDETEIQTLYSNEPNTNILYLLNVLKPNNF | |||||||||||||
9 | 2eceA | 0.09 | 0.07 | 0.76 | 0.90 | CNFpred | RLHTVHCGP---DAIYISALGNEEGPGGILMLDHY-----------SFEPLGKWE-YLAYDFWWNLP-------NEVLVSSEWAVPNTIEDGLKLEHLKYGNRIHFWDLR-KRKRIHSLTLG-----EENRMALELRPLHD-----PTKLMGFINMVVSLK-------------DLSSSIWLWFYEDG | |||||||||||||
10 | 3a15B | 0.04 | 0.04 | 0.83 | 0.83 | DEthreader | AAMIVGFDLP-DGPHHDLTHHI----ENLIVVGYWKDVSSQ-HRWSSIWWER--DGLGFFREIVAPQFFISMQASHNIALIRSGQDLILPTLQSGMFLNGCNRFVRNIDNFLDLSYNIGHWA---SLDQLE-WSEHLIFTTFFRVARLYHEVSVQLYEYCHGTGMLRD-------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |