Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | AAGQTRTLKLYFIHTKEKAQITYKRNGRYDQKGLQQINRFLRDWRRNEPTKMDPRLLDLVWEVYQKSGSRDYIHVVSAYRSPATNGMLRSRSKGVAKKSQHMLGKAMDFYIPDVKLKTLREVGMKFQVGGVGYYPTSGSPFVHMDVGGVRAW |
1 | 1lbuA | 0.16 | 0.13 | 0.84 | 1.00 | DEthreader | | GLATFN----------------KIYQL-QDDDCTPFTYAELNRC-NSDWARNALVTMWKLQAMRHAMG-DKPITVNGGFRSVTCN--SN-VG--GASNSRHMYGHAADLGAGSQGFCALAQAARNHGFTEILGPGPG-NDHTHVAGGDGRFW |
2 | 1lbuA | 0.16 | 0.12 | 0.79 | 1.00 | DEthreader | | YGL--------------------FNKIYQDDDCTPFTYAELNRCN-SDWARAALVTMWKLQAMRHAMGDKP-ITVNGGFRSVTCNS-N---V-GGASNSRHMYGHAADLGAGSQGFCALAQAARNHGFTEILGHND----HTHVAGGD-GRF |
3 | 1lbuA | 0.20 | 0.16 | 0.81 | 1.70 | HHpred | | ---------------------GLAADGIAGPATFNKIYQLQDDDCTGKVSANALVTMWKLQAMRHAMG-DKPITVNGGFRSVTCNSNV-----GGASNSRHMYGHAADLGAGSQGFCALAQAARNHGFTEIGYPGHN--DHTHVAGGDGRFW |
4 | 1lbuA2 | 0.16 | 0.12 | 0.75 | 1.70 | DisCoVER | | -----P-VNFTELN-------------------------RCDWSGGKAARANALVTMWKLQAMRHAMGD-KPITVNGGFRSVTCNSN-----VGGASNSRHMYGHAADLGAGSQGFCALAQAARNHGFTEILGPGPGHNDHTHVAGGDGRF- |
5 | 1lbuA2 | 0.20 | 0.15 | 0.76 | 0.98 | MRFsearch | | ------------------------------NFTYAELNRCNSDWSGGKVSAATLVTMWKLQAMRHAMGD-KPITVNGGFRSVTCNSNV-----GGASNSRHMYGHAADLGAGSQGFCALAQAARNHGFTEILGPGPGHNDHTHVAGGDGRFW |
6 | 1lbuA2 | 0.19 | 0.15 | 0.78 | 1.64 | SPARKS-K | | ----------------------------PVNFTYAELNRCNSDWSGGKVRANALVTMWKLQAMRHAMG-DKPITVNGGFRSVTCNSNVG-----GASNSRHMYGHAADLGAGSQGFCALAQAARNHGFTEILGPGYPGHNHTHVAGGDGRFW |
7 | 1lbuA | 0.17 | 0.16 | 0.95 | 0.97 | MAPalign | | --LQIRVAGYPGTGAQLAAAVRFQSAYGLADGTTPVFYAELNCNGGAATARANLVTMWKLQAMRHAMGDKP-ITVNGGFRSVTCNSNV-----GGASNSRHMYGHAADLGAGSQGFCALAQAARNHGFTEILGPGYPGHNHTHVAGGDGRFW |
8 | 1lbuA | 0.18 | 0.17 | 0.96 | 0.92 | CEthreader | | SAYGLAADGIAGPATFNKIYQLQDDDCTPVNFTYAELNRCNSDWSGGKVSAATLVTMWKLQAMRHAMGD-KPITVNGGFRSVTCNSNVG-----GASNSRHMYGHAADLGAGSQGFCALAQAARNHGFTEILGPGYPGHNHTHVAGGDGRFW |
9 | 1lbuA2 | 0.20 | 0.15 | 0.76 | 1.67 | MUSTER | | --------------------------PVN----YAELNRCNSDWSGGKVSAAALVTMWKLQAMRHAMG-DKPITVNGGFRSVTCNSNVG-----GASNSRHMYGHAADLGAGSQGFCALAQAARNHGFTEILGPGYPGNDHTHVAGGDGRFW |
10 | 1lbuA2 | 0.20 | 0.15 | 0.74 | 4.05 | HHsearch | | -------------------------------PVNFTYAELNSDWSGGKVSAAALVTMWKLQAMRHAMG-DKPITVNGGFRSVTCNSN-----VGGASNSRHMYGHAADLGAGSQGFCALAQAARNHGFTEIGYPGHN--DHTHVAGGDGRFW |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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