Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MMLVPLITVTVVAGTILVCYILYICRKKIRTVYNDNKIIMTKLKKIKSSNSSKSSKSTDSESDWEDHCSAMEQNNDVDNISRNEILDDDSFAGSLIWDNESNVMAPSTEHIYDSVAGSTLLINNDRNEQTIYQNTTVVINETETVEVLNEDTKQNPNY |
1 | 2ixqB | 0.09 | 0.06 | 0.70 | 0.75 | DisCoVER | | CQVRVGDLTVAKTRLTDAAPIGPVT--VQ-ALGCNARQVALKAGKFFLISDNNRDKLYV----N--IR--PMDNWTTDNGVFYKNDVGSWGGTIGIVPGNYTLTL-----TGGYWSGTTGTT--------KLTV------------------------ |
2 | 6hq6A | 0.08 | 0.06 | 0.77 | 0.83 | DEthreader | | SSDALQLTDNLRDTRHFSNTLFNIMRGGIFDNYYLPLLAHS---NEVHKSPAFPTD-AYSPGMTGQVKEDILSRFG--ELGIFV---------------KTFDYVTFQHQSL-FTYCQIPI---------IYKI---IEVFTTDVFKI-VS-ILESD- |
3 | 3vpeA | 0.11 | 0.11 | 1.00 | 0.44 | CEthreader | | TGGISAVLLSSPQGHILVDGTTEKGAQVVAANIRAMGFKLSDVKYILSTHSHEDHAGGISAMQKLTGATVLAGAANVDTLRTGVSPKSDQFGSLSNFPGSAKVRAVADGELVKLGPLAVKAHATPGHTEGGITWTWQSCEQGKCKDVVFADSLTAVSA |
4 | 5zy9C | 0.05 | 0.05 | 1.00 | 0.52 | EigenThreader | | PNIFNMELWNISGHAKHYKPAASLMFDFMKYVYDVFGIEFNLELSTRPEKAMGELEQWERAESQLAEALDEFVTDALKRQHQCAIYGSLERFVAVLVKFPFWLSPRQVLIVTVAHYNFILVVGEKETRSVNIRTRTGTKTLEEAIAMFKELEETKAAD |
5 | 2jo1A | 0.23 | 0.04 | 0.20 | 0.25 | HHpred | | ---------LVIAGILFILGILIVLSRRCRCKFNQQQRTG---------------------------------------------------------------------------------------------------------------------- |
6 | 5z1fA | 0.05 | 0.02 | 0.40 | 0.42 | MRFsearch | | ---SSRLWAFLGAVYWISLVTYFFLWKAYKHVSSLPEQFAILVRDMP-----APPDGQTQKEFIDSYFREI--------------------------------------------------------------------------------------- |
7 | 3e9pA2 | 0.14 | 0.08 | 0.53 | 0.32 | FFAS-3D | | --------YTAFSRLTLLLRALKTNEESAKMILLSDP---------TITIKSYHLWPSFTDEQWITIESQMRD----------------LILTEYGRKYNVNISALTQTEIKDIILG----------------------------------------- |
8 | 5aiwA | 0.11 | 0.09 | 0.79 | 0.73 | SPARKS-K | | -------------SNTNQSESEKIIKEFYKTVYNYEK----SQKEISMTTVKELA----TDNVYQELQNEINVNNSYQNTIQKSSVNENEIK---------ILAYESKDNSQQYLVTAPIHQVFNGTKNDFEINQLIQIKNQKITQRTTIQLGEE--- |
9 | 4rp8A | 0.10 | 0.03 | 0.26 | 0.50 | CNFpred | | ---WTTIICTAILVSLYWGITSNMMYKPTQEVTD-GCGFSIGHQQ----------------------------------------------------------------------------------------------------------------- |
10 | 5j8bz | 0.08 | 0.07 | 0.84 | 0.83 | DEthreader | | GQVLLEARIRAQAKRLAERKAEAERLKEILENLSRIRYVFHLIDTPG--V---D--FTYEVSRALAVGVLI-VEILEAIVQRIPPPKGD-ALKALIFDSVYDGVIP---YLRL---FEGRVRDRI-------EALGWLVAIDVGDTITPTPSPYP--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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