>PF05929 (272 residues) KRFRIGVEGATTDGREIQREWLVQMAASYNPTVYTALINLEHIKSYSPDSAFNRYGKVTA LVAEEIQDGPLAGKMALYADIEPTDSLVALVKKGQKLFTSMEVSPKFADTGKAYLVGLAA TDDPASLGTEMLAFSASAAHNPLANRKQNPENLFTAAEETQIELEEAQDEKPSLFARVTA LFTKKEQTDDARFSDVHKAVELVATEQQNLSERTDKSLSDQDQRLSELESSLQEQQAAFA ELQQQLSREDSRKDYRQRAPGGDAPAGTLTNC |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | KRFRIGVEGATTDGREIQREWLVQMAASYNPTVYTALINLEHIKSYSPDSAFNRYGKVTALVAEEIQDGPLAGKMALYADIEPTDSLVALVKKGQKLFTSMEVSPKFADTGKAYLVGLAATDDPASLGTEMLAFSASAAHNPLANRKQNPENLFTAAEETQIELEEAQDEKPSLFARVTALFTKKEQTDDARFSDVHKAVELVATEQQNLSERTDKSLSDQDQRLSELESSLQEQQAAFAELQQQLSREDSRKDYRQRAPGGDAPAGTLTNC | |||||||||||||||||||
1 | 5al7A | 0.08 | 0.04 | 0.45 | 0.57 | DisCoVER | SYS-AKM----------DYGKS--VVNILPS--VEMLVNFNG----DMTRSSKRSCLLYAERV----------DFLLQLRLTEK--S-----DQRRMYITTVLQ-FIDNVVRMLQLELHLTTRVHDYYL--QFVEIRSDKNLVH------LSLPCRS----APLNTVLFYI----------------------------------------------------------------------------------------------------- | |||||||||||||
2 | 3iydD | 0.06 | 0.04 | 0.67 | 0.67 | DEthreader | RAPTLGIQAF-----EPVLIGAIQLH--P----LVCAA------------------YNADFDQMAVHVPLTLAQ-------------------------MSTN-------------NILSPANGEPI-IVPSVVLGLYTGRALWMIVKGLKPTVIFAIMGFA-EKQV----------Q--QLNFREGLNVLQYFISTHGARKGLA---DTALKTA--NSGYLTRR-LVD-VAQDLVVT-ED-DCGTHEAEPRTLLGRDLARHIINEAINDKH | |||||||||||||
3 | 1na6B | 0.08 | 0.08 | 0.95 | 0.72 | CEthreader | TGGHQVGLYIPSGIVEKLFPSINHTRELNPSVFLTAHVSSH-------------DCPDSEARAIYYNSAHFGKTRNEKRITRWGRGSPLQDPENTGALTLLAFKLDEQGGDCKEVNIWVCASTDDVIETAIGEVIPGALISGPAGQILGGLSLQQAPYILPEDWHLRFPSGSEIIQYAASHYVKNSLDPDEQLLDRRRVEYDIFLLVEELHVLDIIRKSVDEFIALANSVSNRRKSRAGKSLELHLEHLFIEHGLRHFATQAITEGNKKPDF | |||||||||||||
4 | 1y1uA | 0.05 | 0.04 | 0.78 | 0.73 | EigenThreader | TKFAAVRLLVGGKLNVHMN----------PPQVKATIISEQQANENTRNECSGEILNNCCVMEYHQAT----GTLSAFRNMSLKRES------VTEEKFTVLSVGS---NELVFQVKTLSLPEPGRVPFAVPDKVLWPQLCEALNMKFKAEVQSNRG------------LTKENLVFLAQKLFNISSNHLEDYNSMSQFNR----------------ETFWQWFDGVMEVLKKHHKPHWNDG----------AILGFVNKQQAHDLLINKPD | |||||||||||||
5 | 5mg8A | 0.11 | 0.09 | 0.81 | 0.34 | HHpred | ----------------ATKRKL-DFMSSAWEDAYQTYQLLKEYESAFEAPAYGPIYMNLKCKEKGFAAEGFFRTDTFRTFIMSNYKLMDLTSKYTP--TIREFSSEFEPPGDGYVIDFLEGPEVLKIHQIPIAKRELP-PASVNLNDPVLKTYLAGSSIHLVFAYGDRETRRDPLP-SRSIYFSE-NVEMDLVKRKEEQLNAQLSQLENLQNEERK----LQEKVNEHESLLSRTNDILSTLRKE--------------------------- | |||||||||||||
6 | 6gaoA1 | 0.10 | 0.03 | 0.32 | 0.30 | MRFsearch | --------------------------------------------------------------------------------------------------------------------------------------------------------------------EEIKKQVQVNVDDIRAANIKL-DGLGRQIADISNSISTIESRLGEMDNRISSQVTQLSNSVSQNTQSISSLGDRINAVEPRVDSLDT--------------------- | |||||||||||||
7 | 6sihA2 | 0.12 | 0.08 | 0.68 | 0.62 | FFAS-3D | ------------FFEGV-TKAMQDLVDAYND-------LVTNLNAATDYN----------------SETGTKGT------LQGISEVNSIRSSILAD-----LFDSQVVVMLSMQFGLSLNDA----GT--LSFDSSKFEQKVKEDPDSTESFFSNI-----------TEGKGIFSKLKATLQEMTGKDTKYDESLTNDIKSLNTSKDSTQAMIDTRYDTMANQWLQYESILNKLNQQLNTVTNMINAA----------------------- | |||||||||||||
8 | 2iubG | 0.06 | 0.05 | 0.83 | 0.62 | SPARKS-K | TPTWINITGIH------RTDVVQRVGEFFG-------IVLEDILNVHQRPKVEFFYVFIVLKMFTYDKNLHEESEQVSLILTKN------------CVLMFQEKIG-------------------DVFDPVRERIRYNR--GIIRKKRADYLLYSLIDALVDDYFVLLEKIDDEIDVLEEEVLERPEETVQRTHQLKRNLVELRKTIWPLREVLSSLYRETVPYFRDVYDHTIQIADTVETFRDIVSGLLDVYLSSVSNKTNEVMKVLTIIA | |||||||||||||
9 | 4nbqA | 0.10 | 0.07 | 0.69 | 0.54 | CNFpred | NEVQVIATVLSVD-SKVPTDIPAILGASA-------AIGLSGIPF---------NGSLGAARVGYRG---------GEYLLNPSLDELK----DSALDLVVAGTR-----DAVLMVESEAQELPESVMLGAVLHGHQA--------------------------------MQVAIQAIAEFIQEAGGAKWEWE--NTALEKWVVEKSEAPLKKAYQIQ-----EKTARQAQIQAIRDQLLADRAAEREGEENAVNE----------HELAVI | |||||||||||||
10 | 6rw9A | 0.11 | 0.07 | 0.68 | 0.67 | DEthreader | ---APGAVSS----LSQNLLLADAIAQRYSTWAGVSQYYPE---KEDTSDPMHYKV---------------------------STLMKLLDLLALLGKPSIFWENPSLSNAAD--------------------------PDVANTLT-G-LFRPQQNELGQML---------RSYALYDENVSEKMQSEWRRRRQEWEIQKNNAESEIRQIDAQLEALAVRRTATEMQREHMEIQQAQTQAQLEFLQRKNKALYLRL--LM----------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |