>PF05928 (207 residues) MDFPPSKVVADAVEAARAAAVAASEARCAVFVAEKEAKAAVQFAAIAVDKVEAVKASSNV DLVDFKYHVNIKNSLRYAIQEMRRQTKLLHSVQKLCSTIPEVQGGKIGKVRGHLEHVCKE LDKTSIVCEEDLETKNPTWDLYDNPSVDDEHPLDDDELGDGYSTEDPELWEMVFEDFKWE EIKANVSFEEHYRVINYRFEEINDRNM |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MDFPPSKVVADAVEAARAAAVAASEARCAVFVAEKEAKAAVQFAAIAVDKVEAVKASSNVDLVDFKYHVNIKNSLRYAIQEMRRQTKLLHSVQKLCSTIPEVQGGKIGKVRGHLEHVCKELDKTSIVCEEDLETKNPTWDLYDNPSVDDEHPLDDDELGDGYSTEDPELWEMVFEDFKWEEIKANVSFEEHYRVINYRFEEINDRNM | |||||||||||||||||||
1 | 1sjjA | 0.05 | 0.05 | 0.91 | 1.00 | DEthreader | EEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQ--QKDYE--T-A--TLSEIKAL-LKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLET-IDQLLEYAKRAAPFNNWMEGAMEDL-QDTFIVHILEEHARQQQNERLRKQFGAQNV--------- | |||||||||||||
2 | 6w2vA2 | 0.16 | 0.07 | 0.46 | 0.68 | DisCoVER | --------------AVSAAAEAVKKAADLLHPSE-AAQAALELAKAAAEAVLIACLAKSDIAKCIAASEAAEEASKAAEEAQRHP--D-----------------------------SQKARDEIKEASQKA------EEVKRCER-----AQ------------------------------------------------------ | |||||||||||||
3 | 6u8yX | 0.06 | 0.05 | 0.83 | 0.83 | DEthreader | IAIGVSSWALMSLAGAWIMTFASFMVFYNRHAS---LK-YFVLSIAGAYAMLLAIGIIAKETLIYALFLVAFGVKAGLHVWAPDAYSETN--------------------QSYTAMFSGVLSKTGVYGFFLLYLLMYGKL----AITL--GNV-RSAP--TFGYIIAFLGGLTIMGSQGYIGAAATYAISHALFKLFFV-IG-VYLL | |||||||||||||
4 | 6a4uA | 0.09 | 0.06 | 0.71 | 0.64 | CEthreader | HEDCEASINKQINMELYASYVYLSMAYYFPGFAKFFKESSDEEREHAQTFMKYQNKLQQIAAPSMREWGTGLEALQAALDLEKQVNQSLLELHSTASGNPHLTKLLEDEYLEEQVDSIKKIGDMITKLKRAGPTGLGEYMFDKELN------------------------------------------------------------- | |||||||||||||
5 | 3qweA | 0.04 | 0.03 | 0.89 | 0.72 | EigenThreader | LLAWTEKRASYELEFAKSTMKIAEAGKVSIQYTLFLEHDLSLGTLAMETVAQQKRDYYQPLAAKRTEIEKWRKEFKEQWMKEQKALRRAQLQYVQRSEDLRARAQEAEALYQACVRDLEIAKQRIVSHVRKLVFQGDEVLRRVTL------SLFGLRGAQAERGPRAFAALAECCAPFEPGQRYQEFVRAL---------------- | |||||||||||||
6 | 6bfiA | 0.14 | 0.12 | 0.80 | 0.29 | HHpred | -----PEGKRKLLDGARGVIN--GMSDLLMCADRSEVRKMVKVCRSVQEYLDVAKVIDVEDLATFLQNLAHAQMLKSELGTVREQIPILISSIRVCCLVIVKKDYVIQKLFIAIEEIIRVLQLTT--TFE------EEASA-ASLAHMFHQAQDALASG-DI-S--RSTLD------------AVRKCISEGRRVAAL--------- | |||||||||||||
7 | 4onsA | 0.14 | 0.11 | 0.79 | 0.62 | MRFsearch | ----KAHVLAASVEQATQNFLEKGEQIAKESDLKEELVAAVEDVRKQGETMRIASSEFADDPCSSVKRGTMVRAARALLSAVTRVMRLLSHLKIVEEALEAVKNANEQDLANRFKEFGKEMVKLNYVAARRQQE-----------------------------LKDPHCRDEMAAARGALKKNATMLYTASQAFLR----------- | |||||||||||||
8 | 6cq0A3 | 0.12 | 0.11 | 0.86 | 0.72 | FFAS-3D | -KVHPRDLDGDASMAKAITGVVCYACRIASTLLLYQELMRKGIRWLIE---------------------LIKDDYNETVHKKTEVVITLDFCIRNIEKTVELG--EISDIHTKLLRLSSSQGTIETSLQDIDSRLSPGGSLADAWAHQEGTHPKDRNVEKLQVLLNTEIYYQFKKDLAYNEEQIKQKLYYHATKAMTHFTD------ | |||||||||||||
9 | 4uosA | 0.13 | 0.12 | 0.87 | 0.71 | SPARKS-K | ------------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEEVKKMLEKMIEEIKKMLAIVKEMLEKKEIKKMLENGED------------SEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVG-- | |||||||||||||
10 | 2yfaA | 0.08 | 0.07 | 0.83 | 0.65 | CNFpred | ENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMA---RPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAESSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFEN--------------------------------AVLAYRDAVRQFRDAITTSRAEMTVQGADIVKRSDALYQIQL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |