Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | ITNDAFYPDVSLEHARDTMRLDGTVTDARLRHELLAAIASVNDELRAARSAWREAGITRLADVPADQLDGESVLLQHYRRAVYCLAKATLIERYRDYDTTGDGARRADELEPQSDELRRDARWAISDIVGRPRVTVELI |
1 | 5ydnA | 0.18 | 0.12 | 0.69 | 0.74 | DisCoVER | | -----MNY-ATVNDLCARLLTDGQPDDAVAEQALADASAFIDGYL--A----------ARFVLPLTVV------PSLLKRQCCVVAWFYLNES---------------QPTEQITATYRDTVRWLEQVRDGKTDP---- |
2 | 6hraB | 0.05 | 0.04 | 0.91 | 1.00 | DEthreader | | AQRNPVMANFAEALAEGRSAQALLMIAMVGAQR-RKTEIALTILLIALTIVFLLATALLVCLI---------PT-TIGGLLSAIGVAGMSMVIAVNMVDLDSNPTKLIEVVHIGKQMLMTRGSLTTFSIAN-IFLPLLK |
3 | 1jigA | 0.09 | 0.09 | 0.93 | 0.79 | CEthreader | | LNKQVANWNVLYVKLHNYHWYVTGPHFFTLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSESAEEMVQTLVNDYSALIQELKEGMEVAGEAGDATSADMLLAIHTTLEQHVWMLSAFLK---------- |
4 | 1ztsA | 0.12 | 0.10 | 0.86 | 0.75 | EigenThreader | | ------MLLITPDELKSYSVF--ESVKTRPDELLKQDILEATADIILKVGH----DFSDAEYIPLP-----ETVRLALLKLSQFYALINGDESIIKGYTTEKIGDYSYTLGDGSSLQKPDVYALIKDYVKPRMRSH--- |
5 | 1rw9A1 | 0.21 | 0.17 | 0.81 | 0.27 | HHpred | | -GRTSVFTDLSLAQLATAWATPTAFGDAAVLAAIKAGLADANTLCGNWWSWEI--GVPALADALHAELS--AAERTAYCAAID---------HFPDPKITSVGANRVDLCQGI----------IIRSLAGEDPTKL--- |
6 | 5vgtA | 0.12 | 0.09 | 0.78 | 0.43 | MRFsearch | | ------KGEIVLFALRKFAIASNASLTDVEPQSIEDGVNDLEDMMSEWMINPGDIGYAFATGDEQPLPDDESGLPRKYKHAVGYQLLLRMLSDYSL---------------EPTPQVLSNAQRSYDALMT--------- |
7 | 3o6xA3 | 0.13 | 0.12 | 0.86 | 0.68 | FFAS-3D | | --------EVELEKYTMKVQIESRVLGDLAINHIVPIAVSYQNRLLENLCRMKEIFSEEEYEVMSADRKELIKEISHRVSAIKVLVR-DMTEARKVANHKENFKEKAFAYEETVRPYLESIRDHIDHLE---------- |
8 | 5k7vA2 | 0.15 | 0.14 | 0.89 | 0.71 | SPARKS-K | | ARAISAIAELAKKAIEAIYRLDNHTTDKFMAAAIEAIALLATLAILAIALLAS--NHTT------------EEFMAKAISAIAELAKKAIEAIYRLAD-NHTSPTYIEKAIEAIEKIARKAIKAIEMLAKNITTEEYKE |
9 | 1a0bA | 0.10 | 0.07 | 0.76 | 0.53 | CNFpred | | ----------DIPMLEQYLEL---VGPKLITDGLAVFEKMMPGYVSVLESNLTAQDKKGIV-----------EEGHKIKGAAGSVGLRHLQQLGQQIQSP-DLPAWEDNVGEWIEEMKEEWRHDVEVLKA--------- |
10 | 6hraB | 0.08 | 0.07 | 0.90 | 1.00 | DEthreader | | AQNFIVWVANFEALAEGRSKQANLMI-AMVAQR-RKT-EILTILLIALTIVFLLATATLVALLVC-------IPTTIGGLLSAIGVAGMSMIATVMVDLDS-NPT-KLIEVHIGKQMLMTRGSLTTFSIANV--SAMLR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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