>PF05919 (479 residues) EFDDSNHFVSVKSSPTGPSTLTALWGLWNHSYESFNWLFKITSLSGVDYLTKIMNWTWLK DLGNKNNNKWSKQFLGSLSLIYDPECKVRIVAMLDYTTQLFLRPIHNDLFKLLKKLPQDR TFTQNPLNDWENNEHSFWSIDLTAATDRFPISLQRRLLLYIYSDPEIANSWQNLLVHREY ARNGLNPIKYSVGQPMGAYSSWPAFTLSHHLVVHWCAHLCHINKFKDYIILGDDIVIHND KVAKKYIEIMGKLGVGLSDSKTHVSKDTYEFAKRWIHKGQEISPLPITGIVNNITNPYIV LMNLYDFFKIKRNQYNFSGDILTMLLKLYQGLKIYKGDKSKKHYYLSLNRFKNLDIFLFA LNNTFGYSTYDHKRSFLISKEYSKDLPGPKIMQDLIGYVISTGLSNLTVESVNKSLKFVD TIIDNKSLLNIEDPNDLSNLPLFKGFQAYISNLRKTVEGWNNKSISLIEASRGLVQMDI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | EFDDSNHFVSVKSSPTGPSTLTALWGLWNHSYESFNWLFKITSLSGVDYLTKIMNWTWLKDLGNKNNNKWSKQFLGSLSLIYDPECKVRIVAMLDYTTQLFLRPIHNDLFKLLKKLPQDRTFTQNPLNDWENNEHSFWSIDLTAATDRFPISLQRRLLLYIYSDPEIANSWQNLLVHREYARNGLNPIKYSVGQPMGAYSSWPAFTLSHHLVVHWCAHLCHINKFKDYIILGDDIVIHNDKVAKKYIEIMGKLGVGLSDSKTHVSKDTYEFAKRWIHKGQEISPLPITGIVNNITNPYIVLMNLYDFFKIKRNQYNFSGDILTMLLKLYQGLKIYKGDKSKKHYYLSLNRFKNLDIFLFALNNTFGYSTYDHKRSFLISKEYSKDLPGPKIMQDLIGYVISTGLSNLTVESVNKSLKFVDTIIDNKSLLNIEDPNDLSNLPLFKGFQAYISNLRKTVEGWNNKSISLIEASRGLVQMDI | |||||||||||||||||||
1 | 3mmpG1 | 0.13 | 0.07 | 0.54 | 1.45 | HHpred | -------------FNFSESCIHM----------ARRKIAKLIGDVPEGMPSFKFALPQAPRVLALRARISDISPFNKAVTVPKNSKTDRCIAIEPGWNMFFQLGIGGILRDRLRCWGIDLN-DQTINQRRASVTNNLATVDLSAASDSISLAL----CELLL-P----PGWFEVLMRSPKGLPDGSVVTYEKISSMGNGYTFELESLIFASLARSVCEILDLDS-SEVTVYGDDIILP-SCAVPALREVFKYVGFTTNTKKTFSEGPFRESCGKHYYSGVDVTPFYIRHRIV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
2 | 6uebA | 0.09 | 0.09 | 0.98 | 1.50 | MAPalign | KFKDQIWGLLIVTKDFVYSQYIAGDQVLSIKILEPYVVNSLVQRDKSYQECLASDLARRILRSIDLGGLPDEDLIIGLKPKRELKIEGRFFALMSWNLRLYFVITEKLLANILPLFDALTMTVFKKLIDRVSRVTYAFHLDYEKWNNHQRLESTEDVFSVLDLKRVFS-RTHEFFQKAWIYCNGPTCWNGQDGGLE-GLR-QKGWSLVSLLMIDRESQIR-NTRT-KILAQGDNQVLCPASIYRAVEEGASKLGLIIKKEETMCSYDFLIYGKTPLFRGNILPKRWARVSCVQIVNLANIMSTVSTNALTVAQHSKPMRDFLLMSVQAVFHIIYLDPSLGGISGMSLVSEGLSFWREIWVDKVENSEFREAILLSKTHRDRTIRRQFRKSLSKTLEESFYNSEMLYAQTWTSKSHHIGSAQGLLYSIYGKVSPRDYLRGLARGVLIGSSICISYILLRLPAAYPTTMKEGNRS------ | |||||||||||||
3 | 3mmpG1 | 0.14 | 0.08 | 0.55 | 5.47 | HHsearch | VPSVEGMLRHCRFSGGATTTNGHPSFKFALPQACT-----------PRA-LKYVLALRSTHF---DTRISDISPFNKAVTVPKNSKTDRCIAIEPGWNMFFQLGIGGILRDRLRCWGIDLN-DQTINQRRASVTNNLATVDLSAASDSISLALCELL----L-P----PGWFEVLMDSPKGLPDGSVVTYEKISSMGNGYTFELESLIFASLARSVCEILDLD-SSEVTVYGDDIILPS-CAVPALREVFKYVGFTTNTKKTFSEGPFRESCGKHYYSGVDVTPFYIRHRIV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 3mmpG1 | 0.13 | 0.08 | 0.57 | 1.73 | FFAS-3D | ----SKYDDFSLGIDTEAVAWEKFLAAEAECALTGESCIHMARRKIAKLIGDVPSVEGMLRHCRFSGGATTTNNRNKAVTVPKNSKTDRCIAIEPGWNMFFQLGIGGILRDRLRCWGIDLN-DQTINQRRASVTNNLATVDLSAASDSISLALCELLLP---------PGWFEVLMSPKGRLPDGSVVTYEKISSMGNGYTFELESLIFASLARSVCEILDLD-SSEVTVYGDDIILPSC-AVPALREVFKYVGFTTNTKKTFSEGPFRESCGKHYYSGVDVTPFYIRHRI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 3agpA2 | 0.14 | 0.10 | 0.74 | 3.18 | HHpred | --RLYRPDY---SEDFNFLGESCIHMARRKIAKLIEGMLRFSGANRSHP-SFKFALPQAPKYLALRARISDISPFNKAVTVPKNSKTDRCIAIENMFFQLGIGGI---LRDRLRCWGIDLN-DQTINQRRASVTNNLATVDLSAASDSISLALCELL----L-P----PGWFEVLMDSPGRLPDGSVVTYEKISSMGNGYTFELESLIFASLARSVCEILDLDS-SEVTVYGDDIILPS-CAVPALREVFKYVGFTTNTKKTFSEGPFRESCGKHYYSGVDVTPFYIRHRIVSPADLILVLNNLYRWATIDG---VWDPRAHSVYLKYRKLLPKQLQR----------------------NTIPDGYGDGALVGSVLINPFARVITDELGSYLYDLFSRC------------------------------------------------------------------------------- | |||||||||||||
6 | 5a22A | 0.09 | 0.09 | 0.98 | 1.45 | MAPalign | RIRVPSLGPTFISEGWAYFKLIKMVEPICHFENHIKTSVDEGAKIYAKALASDLARIVLFQQFNDHKKWFDDDLIIGLKGKRELKLAGRFFSLMSWKLREYFVITEYLIKTFVPMFKGLTMADVIKKMLDSSSGCIANHIDYEKWNNHQRKLSNGPVFRVMGGYPSLIERTHEFFEKSMRVHNNTLINSGQEGG-LEGLR-QKGWTILNLLVIQREAKIRNT-AV-KVLAQGDNQVICTNKIMTAIKIGTGKLGLLINDDETMQSADYLNYGKIPIFRGVIRGLRWSRVTCVTIPTCANIMSSVSTNALTVANPINAMIQYNYFGTFARLLMLYLDPSIGGVSGMSLPVTESLSFWRFIHVHMGMSPANLLKTEVKKCLIESRQTIRNQVIKDATIYLYHEEDRLRFLKGLLDGLMRASCCQVIHRTSYPTSNRDMGVILSIDFIGPFSISTTLLQILYKPFLSGKDKNELRE------ | |||||||||||||
7 | 3agpA2 | 0.13 | 0.11 | 0.82 | 3.75 | HHsearch | NARLYRPDY---SEDFNFLGESCIHMARRKIAKLIEGMLRHCRANRSHP-SFKFALPQAPKYLALRARISDISPFNKAVTVPKNSKTDRCIAIENMFFQLGI---GGILRDRLRCWGIDLN-DQTINQRRASVTNNLATVDLSAASDSISLALCELL----L-P----PGWFEVLMDLRGRLPDGSVVTYEKISSMGNGYTFELESLIFASLARSVCEILDLDS-SEVTVYGDDIILPS-CAVPALREVFKYVGFTTNTKKTFSEGPFRESCGKHYYSGVDVTPFYIRHRIVSPADLILVLNNLYRWATIDG---VWDPRAHSVYLKYRKLLPKQLQR----------------------NTIPDGYGDGALVGSVLINWIRYVITDHTRDR-------ERAELGSYLYDLFSRCLSEIDQLIRSNPTKRSGKF-DIQYIACSS-R--------------------------------- | |||||||||||||
8 | 3mmpG | 0.14 | 0.11 | 0.82 | 1.60 | FFAS-3D | QSPFNSEAECISFSPRFAVAWEKFLAAEAECALTGESCIHMARRKIAKLIRALKYVLALRASTHFDTRISDISPFNKAVTVPKNSKTDRCIAIEPGWNMFFQLGIGGILRDRLRCWGIDLN-DQTINQRRASVTNNLATVDLSAASDSISLALCELLLP---------PGWFEVLMSPKGRLPDGSVVTYEKISSMGNGYTFELESLIFASLARSVCEILDLDS-SEVTVYGDDIILP-SCAVPALREVFKYVGFTTNTKKTFSEGPFRESCGKHYYSGVDVTPFYIRHRIVSPADLILVLNNLYRWATIDGV---WDPRAHSVYLKYRKLLP----------------------KQLQRNTIPDGYGD-----GALVGSVLINPFAKNRVITDHTRDRERAELGSYLYDLFSRCLSCDSADLFAIDQLICRS---------------------------------------------- | |||||||||||||
9 | 3agpA | 0.15 | 0.11 | 0.75 | 1.92 | HHpred | -------------------AECALTNARLYRPSLGESCIHMARRKIAKLVEGMLRFALPCPLRASFDRISDISPFNKAVTVPKNSKTDRCIAIEPGWFQLGIGGI---LRDRLRCWGIDLNINQRRAHE-GSVTNNLATVDLSAASDSISLALCELL----L-P----PGWFEVLMDLRGRLPDGSVVTYEKISSMGNGYTFELESLIFASLARSVCEILDLDS-SEVTVYGDDIILPSCAV-PALREVFKYVGFTTNTKKTFSEGPFRESCGKHYYSGVDVTPFYIRHRIVSPADLILVLNNLYRWATIDG---VWDPRAHSVYLKYRKLLPKQLQRNT-----IPDGYGDG-ALVGSVLINPFA--KNRG---WIRYVPTDHTRDREAELGSYLYDLFSRCLSE------------------------------------------------------------------------- | |||||||||||||
10 | 3agpA | 0.12 | 0.10 | 0.78 | 1.34 | MAPalign | EGMLRHCRFSGGATTTNYGPSFKFALPQACTPRALKYVLALR---ASTHFDIRI---------------SDISPFNKAVTVPKNSKTDRCIAIEPGWNMFFQLGIGGILRDRLRCW-GIDLNDQTIRAHEGSVTNNLATVDLSAASDSISLALCELLL-----PPGWFEVLMDLRSP-KGRLPDGSVVTYEKISSMGNGYTFELESLIFASLARSVCEILDLD-SSEVTVYGDDIILP-SCAVPALREVFKYVGFTTNTKKTFSEGPFRESCGKHYYSGVDVTPF---YIRHRIVSPADLILVLNNLYRWATIDGVWDPRAHSVYLKYRLQRNTIPDGYGDGALVGSVLIN------------PFAKNRGWIRYVPVITDHTRDRERAELGSYLYDLFSRCLSESNAIDQLICRSNPT------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |